CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain PittGG) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 410 LI P I+ V L + S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL H+GI +Y S F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+EK+ Sbjct: 103 LIPPVIVRQVADNLAKFNVNMASLAVKIHDGEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLRHIGIYAYRSGFIKQYMQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKV 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECO5E (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECO57 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O157:H7 GN=kdsB PE=3 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 33 VKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 V AL +A +T T++ K ED F+PN VK V + HG A+YFSR IP+N+ + + P P+L H+G+ + ++ FL+ + + P L+ E LEQL+VLE G+++ V I +H G+D PED+ + E + + Sbjct: 118 VAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNAHGEALYFSRAPIPWNRDTFATTPEPTPLGPWLRHIGLYACNAGFLQRFTTMQPGTLEQIESLEQLRVLEAGHRIAVRITPEHFPPGIDTPEDLARAEKALED 256
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_SHIDS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 59/147 (40.14%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHE--AHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+ + G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V V HE GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWERDRFAKGLETVGDNFLRHLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHV-AVAHEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain SE11) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECOLI (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12) GN=kdsB PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECOLC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECOHS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECODH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |