CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECOBW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECO8A (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECO55 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ECO24 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + MR Sbjct: 103 MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 41/107 (38.32%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 108 DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 428 DP+ VK V+D++GYA+YFSR IP + ++ F H+GI ++ L+ + GL P+ L+ EE LEQL++LENG++++ ++ ++ GV+ PE++E + RE Sbjct: 139 DPHIVKAVIDSNGYALYFSRSPIPCRRGANLSTTF--YRHIGIYAFQREVLQKFAGLEPSMLEKEESLEQLRLLENGFRIQCVETTVDSPGVNTPEELEFVRRIFRE 243
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURVG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 49/153 (32.03%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----------SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMR 425 LI+P ++ V L A PD +TA + D F+PN VK +D A+YFSR IP+++ + P FP H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ + GVD P D+ ++++ R Sbjct: 107 LIDPTLVRDVASHLAAHPDCAIATAAHPIHDAADVFNPNVVKVALDARSVAMYFSRAPIPWSRDAYQPHWPDVAAMPAPAFPVYRHIGLYAYRARFLRTYPSLAQAPIEQAEQLEQLRAMWHGERIAVLITERAPEAGVDTPADLARVQALFR 259
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_TOLAT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP----QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P II V L + + AV + F+PN VK V+D GYA+YFSR IP+++ G + +L H+GI +Y + F++ Y +PL+ E LEQL+VL + K+ V + ++ GVD ED+EK+ F+ Sbjct: 103 LIPPAIITQVADNLANTSAPMATLAVAIEDEHELFNPNAVKVVMDKQGYALYFSRATIPWDRDGFAQQPKQWRHTFLRHIGIYAYRAGFIRQYVSWPVSPLEQIESLEQLRVLWHSEKIHVAVAAENPPAGVDTAEDLEKVRRFL 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RALPJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Ralstonia pickettii (strain 12J) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 55/156 (35.26%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--------SGKVN----PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFMRE 428 LI P +ID V L+ PD +TA + P D F+PN VK V+D A+ FSR +P+ + +G V P P L H+GI +Y + FL+ +P L P++ E LEQL+ + +G ++ V+ D A GVD PED+ ++ + E Sbjct: 106 LIAPTLIDNVAAHLRDHPDCAIATAAHPIHDPADVFNPNVVKVVLDAADRALLFSRAPLPWARDTWTPAVMAGSVAERPLPAMPVLRHIGIYAYRAGFLRRFPQLAAAPIEQTEQLEQLRAMWHGERIAVLTTDDAPAAGVDTPEDLTRVRAAWAE 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_POLSQ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI PE+I+ V + L P ST AV +P + + N VK V++ G A+YFSR IPY + + + +L HLGI +Y ++FL+ Y L P P + E LEQL+ L NGY++ V + GVD +D+E++ + Sbjct: 110 LIPPELINQVAQTLAEHPQCAISTVAVLISEPSEIDNSNVVKVVLNREGEALYFSRAPIPYVRDPQELIKTEHLRHLGIYAYRADFLQAYTRLDPAPPEQAEALEQLRALWNGYRIAVHTAPEAPPAGVDTLDDLERVRQLL 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_LEPCP (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN-----PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 410 LIEP +ID L D V STA +L + + +PN VK V D G A+YFSR +P+ + G + P L H+GI Y + FL+ +P L +PL+ E LEQL+VL +G ++ V + G+D PED+E++ Sbjct: 124 LIEPGLIDACAGLLAQRSDCVMSTAAHALDDVEEYGNPNVVKVVTDAVGRALYFSRAPLPWWRDGYASGVLALPDPAPLRHIGIYGYSAGFLRRFPSLPESPLERIESLEQLRVLWHGERIAVHLSAVRPGPGIDTPEDLERV 266 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |