CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain PittEE) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKI 410 LI P I+ V L + S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+EK+ Sbjct: 103 LIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQNVQKVQLADAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKV 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ENTS8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I P II V + L +A + + AV ++AF+PN VK V+D GYA+YFSR IP+++ + +L H+GI Y + F++ Y +PL+ E LEQL+VL +G K+ V + GVD PED+E++ + MR Sbjct: 103 MIPPAIIRQVAENLASAQAGMATLAVPVHDAQEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAQSRDTIGDSFLRHIGIYGYRAGFIRRYVTWPASPLEQIEMLEQLRVLWHGEKIHVAVAAVVPGTGVDTPEDLERVRAEMR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DELAS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----------------SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIES 416 LI P++ID V L P A TA ++ D +PN VK V D G A YFSR IP+ + + +P F L H+GI SY + FL+ +P L P P ++ E LEQL+ L +G+++ V H GVD PED+E++ + Sbjct: 106 LIAPDLIDAVAALLPQQPSASMGTAAHAIDSLADFTNPNVVKVVCDAQGMAHYFSRAPIPFAREHAGQAWWEAASAAASAAPGHPGFAPLRHIGIYSYRAGFLRSFPQLSPAPTEVLEALEQLRALWHGHRIAVHLTPHAPGPGVDTPEDLERVRA 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=kdsB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 49/147 (33.33%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERN 434 LI E ID ++ + ST V L+P+D DPN+VK V++ GYA+YFSR IP+ ++ + Q H+G+ ++ + L+ + L PT L+ E LEQL++LE+GY+++ + + GV+ ED+E + + ++R+ Sbjct: 101 LISHETIDLALEPFFSPNPPDCSTLVFPLQPDDWAQLHDPNQVKVVLNREGYALYFSRSPIPFQRNQLTSTQC--YRHVGLYAFKAEVLQCFAALPPTMLEEAESLEQLRLLEHGYRIRCMVTHDDQPGVNTAEDLELVRTLFKQRH 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_SODGM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Sodalis glossinidius (strain morsitans) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 54/147 (36.73%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG----KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 LI P+II V L A + + AV E+AF+PN VK VVD GYA+YFSR IP+++ G + + L H+GI +Y ++F++ Y +PL+ E LEQL+VL G K+ V + GVD PE++ ++ ++ Sbjct: 103 LIPPQIILQVADNLAGAEAGMATLAVPITTAEEAFNPNAVKVVVDARGYALYFSRATIPWDREGFARSREHLSHSLLRHIGIYAYRADFIRRYVSWSASPLEKIEILEQLRVLWYGEKIHVAVSSVAPGMGVDTPEELAQVRLLQQQ 249
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DESAA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 + +PE ID V L P +T ++ E + DP VK V D G+A+YFSR IP+++ G N +F HLG+ +Y +FL + L L+ E LEQL+ LE G +K + +++ VD PED+ +IE+ ++++ Sbjct: 104 VFDPECIDEVTAPLIGDPGTGMTTLAFAIVNEREMTDPKDVKMVFDQDGWALYFSRATIPHDRDG--NMEFDTYKHLGVYAYTMDFLAEFCSLPEGHLEKIEKLEQLRALEYGLGIKTVVTAYDSPEVDLPEDIARIEALLKDQ 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLL2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 425 LI+P ID ++ A ST V L PED DPN VK V+D +G A+YFSR +P+ + QF H+G+ ++ + L+ Y L P+ L+ E LEQL++LENG+ ++ + + GV+ PED++ + +R Sbjct: 101 LIDPRNIDLCLEPFLADNPPDCSTLVYPLLPEDFQQIDDPNVVKVVLDRNGNALYFSRSPVPFQREVYAATQF--YRHIGLYAFSAEVLQHYASLPPSMLEKAESLEQLRLLENGFSIRCVTTTVDHPGVNTPEDLDLVRRMLR 242
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_YERE8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 L+ PEII V + L A+ + + AV E+AF+PN VK V+D GYA+YFSR IP+ + K +L H+GI +Y + F++ Y P+ L+ E LEQL+VL G K+ V + A GVD ED++++ + M Sbjct: 103 LVPPEIIRQVAENLAASSAGMATLAVPIESSEEAFNPNAVKVVMDAQGYALYFSRAAIPWERERFAQSKETIGDCFLRHIGIYAYRAGFVRRYVNWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPAVGVDTQEDLDRVRAIM 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_METFK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=kdsB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 55/145 (37.93%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIES 416 LI+P +I V L A +A +TA L + +PN VK V+D G+A+YFSR IPY + + P P H+GI +Y + FL+ Y L P+ ++ E LEQL+VL +GYK+ V I A GVD D+ + S Sbjct: 103 LIDPRLIGEVAGNLSAHAEASMATACHVLHDTPSILNPNIVKVVLDQQGHALYFSRAPIPYPRDAFAANQDIPPGMPIYRHIGIYAYRAGFLRAYAALTPSAIEYFESLEQLRVLWHGYKISVEITEKAPASGVDTEADLAYVRS 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_METCA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylococcus capsulatus GN=kdsB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 49/150 (32.67%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIESFMRER 431 ++ ++ + +AL D +T + +PE+ FDPN VK V D A+YFSR +P+++ +G P PY H+G+ +Y +++L+ Y L P+PL+ E LEQL++L +G ++ V+ V+ A GVD D+E+ + R Sbjct: 106 MDAALLRALAEALGRREDCRVATLAAPIHRPEEIFDPNVVKVVTDGENRALYFSRAAVPWDRESFAEGAGVPMPGMPYRRHIGVYAYTASYLRRYVDLEPSPLEHVERLEQLRILWHGDRILVVPVEGAPAPGVDTAADLERARRHLSGR 255 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |