CF417463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AV_TETTH (Histone H2A.Z OS=Tetrahymena thermophila GN=HTA3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.711e-13 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSS 128 ITPRHL LAIRGDEELD LIK TIAGGGVIPHIHK+L+ K S Sbjct: 92 ITPRHLLLAIRGDEELDILIKATIAGGGVIPHIHKALLGKHS 133
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_SCHPO (Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.338e-12 Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELDTLI+ TIAGGGV+PHI+K L+ ++ ++ Sbjct: 89 ITPRHLQLAIRGDEELDTLIRATIAGGGVLPHINKQLLIRTKEK 132
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K+ Sbjct: 86 ITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEKK 129
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K+ Sbjct: 86 ITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEKK 129
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_LODEL (Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K+ Sbjct: 86 ITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEKK 129
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K+ Sbjct: 86 ITPRHLQLAIRGDEELDNLIKATIAFGGVLPHINKALLLKVEKK 129
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_CANAL (Histone H2A.Z OS=Candida albicans GN=HTZ1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K+ Sbjct: 86 ITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEKK 129
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2A8_ARATH (Putative histone H2A.8 OS=Arabidopsis thaliana GN=At4g13570 PE=5 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIH 104 ITPRHLQLAIRGDEELDTLIKGTI GG VIPHIH Sbjct: 85 ITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.979e-11 Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K K+ Sbjct: 87 ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_KLULA (Histone H2A.Z OS=Kluyveromyces lactis GN=HTZ1 PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.979e-11 Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134 ITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K K+ Sbjct: 87 ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130 The following BLAST results are available for this feature:
BLAST of CF417463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417463 ID=CF417463; Name=CF417463; organism=Citrus sinensis; type=EST; length=360bpback to top |