CF417463

Overview
NameCF417463
Unique NameCF417463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length360
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_ASHGO (Histone H2A.Z OS=Ashbya gossypii GN=HTZ1 PE=3 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.979e-11
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134
            ITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K  K+
Sbjct:   87 ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.376e-11
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+K+L+ K
Sbjct:   94 ITPRHLQLAIRGDEELDTLIQATIAYGGVMPHINKALLLK 133
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   88 ITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 127
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   92 ITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   91 ITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 130
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   93 ITPRHLQLAIRGDEELDTLIRATIAYGGVLPHINRALLLK 132
[Close]
BLAST of CF417463 vs. ExPASy Swiss-Prot
Match: H2AZ_CHAGB (Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 ITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 122
            ITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   92 ITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
The following BLAST results are available for this feature:
BLAST of CF417463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
H2AZ_ASHGO1.979e-1170.45Histone H2A.Z OS=Ashbya gossypii GN=HTZ1 PE=3 SV=3[more]
H2AZ_YARLI3.376e-1180.00Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 ... [more]
H2AZ_PHANO4.410e-1177.50Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=... [more]
H2AZ_NEUCR4.410e-1177.50Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 S... [more]
H2AZ_MAGGR4.410e-1177.50Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 S... [more]
H2AZ_GIBZE4.410e-1177.50Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1[more]
H2AZ_CHAGB4.410e-1177.50Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-393 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417463 ID=CF417463; Name=CF417463; organism=Citrus sinensis; type=EST; length=360bp
GTATTACTCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTT
GACACTCTCATTAAAGGAACCATAGCCGGTGGAGGAGTTATTCCTCATAT
CCACAAGTCCCTCATCAATAAATCCTCCAAAGAGTAGTTCGTGACACCGT
CATCCTCTCGGCTTTGTTTATGTGTGTACTTTTAGCTGTGCTGAAATATC
TAAATGAGAAATGATGCCAAAGATGTGTTAATGCTAGGAATCTGCATTCT
TCAATCCTCATTTCATGCAGCGACGAATTATGGTGCTTGTTTTTTCCCAT
GTTGGTATTGAACTGTTACTGTTTAATTTTTAAATAATTCTATATCTGTT
TCTTTGTTTG
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