CF417465
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39 Identity = 88/229 (38.43%), Postives = 134/229 (58.52%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 + +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVPK + DW+ YETL+ VVPRSS +L ED + L VTLF Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEYETLSEMVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC1_XENTR (V-type proton ATPase subunit C 1 OS=Xenopus tropicalis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39 Identity = 88/229 (38.43%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 + +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVPK + DW+ YETL VVPRSS +L ED + L VTLF Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGTVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYNDWVKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLF 230
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39 Identity = 86/229 (37.55%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 + +W++S P + W+++ ++ + + +FNIP L+VGT K ++FVESV KI + + + LE +L +GV + TY+TRF WD AKYP L+ I + + V +I++DLK R + YN+++ L ++ RK GSL R L+++VK ED ++ SE+L TLL +V K + +W +YETL+ VVPRS+ LL+ED E L++VTLF Sbjct: 2 TEFWLISAPGDKTCQQTWDKMNMATAESNNLSTNNKFNIPELKVGTLDVLVGLSDELAKLDTFVESVVKKIAQYMTDVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKSISEIMSKQVTQIDNDLKARASAYNSLKGSLQSLERKNVGSLLTRSLADIVKKEDFVLDSEYLTTLLVIVSKTNYPEWQKTYETLSEMVVPRSTKLLFEDQESGLFSVTLF 230
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_DICDI (V-type proton ATPase subunit C OS=Dictyostelium discoideum GN=vatC PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38 Identity = 81/225 (36.00%), Postives = 140/225 (62.22%), Query Frame = 3 Query: 18 YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 +W++S P A +++++ ++ +K + + +FN P LRVGT K ++ VES + KI RQ+ +L + SLS++G + YL +F WD+AKY L+EIV+ I + V+KI+DDLK++ +EY+ + S + + RK SG+L VR L++L+ ++I+ +++ T V+PK S K++LA YET++ +V+ RS+ + +DN+Y LY+V LF Sbjct: 7 FWLISAP-NLPGADIFDQVNQKTAKENSLSENKKFNTPALRVGTLNSLITLNDELQKIDTIVESTTKKIARQLVDLVGTKPGKDKSLSINGHTIPQYLQQFAWDDAKYNLKLSLQEIVEKISSAVSKIDDDLKIKSSEYSTLSSSVASEERKASGNLQVRTLNDLITADNIVQTDYFTTAFVVIPKQSEKEFLACYETISDFVLGRSAKRVAQDNDYFLYSVILF 230
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_CAEEL (V-type proton ATPase subunit C OS=Caenorhabditis elegans GN=vha-11 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 85/230 (36.96%), Postives = 138/230 (60.00%), Query Frame = 3 Query: 9 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 + YW++S+P + A W++L S ++ ++ IP+L+VGT K ++ E+V K+ + E LE + +L + + TY+T+F W+ AKYP L+ + + I +++I++DLKV+ YNN+++ L +++RK GSL +DL++LVK +D ++ SE+L T++ VVPK S K+W Y TL+S VVP SS LL E+ E+ALYTVTLF Sbjct: 6 SGEYWLISVPGEKGANDAWDKLNRSTGNTSTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQTVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLF 232
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_CAEBR (V-type proton ATPase subunit C OS=Caenorhabditis briggsae GN=vha-11 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.320e-36 Identity = 84/230 (36.52%), Postives = 136/230 (59.13%), Query Frame = 3 Query: 9 ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 + YW++S+P + A W++L S ++ ++ IP+L+VGT K ++ E V K+ + E LE + +L + + TY+T+F W+ AKYP L+ + + I + +I++DLK++ YNN+++ L +++RK +GSL +DL++LVK ED ++ SE+L T++ VVPK K+W Y TL+S VVP SS LL E+ E+ALYTVTLF Sbjct: 7 SGEYWLISVPGEKGANDAWDKLNRATGNISTNS---KYLIPDLKVGTLDQLVGLSDDLSKLDTSAEGVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQITQIDNDLKMKSLAYNNLKNALASMDRKTTGSLLTKDLADLVKAEDFVLNSEYLQTIIVVVPKILVKEWETKYATLSSMVVPGSSKLLTEEGEHALYTVTLF 233
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC2_RAT (V-type proton ATPase subunit C 2 OS=Rattus norvegicus GN=Atp6v1c2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.661e-36 Identity = 84/229 (36.68%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 S +W++S P R+ SK + +F IP+ +VGT K ++F ES+ ++ + + E +E G +L +GV + +++T F WD AKYP PL +VD + +A+IE DLK R A Y+ +++ L + +K +G+L R LS++V ED ++ SE+L+TLL +VPK S W +YE+L+ VVPRS+ L+ EDNE L+TVTLF Sbjct: 2 SEFWLISAPGDKENLQALERMNSVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKVHENLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKKSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSYVQWQKTYESLSDMVVPRSTKLIAEDNEGGLFTVTLF 229
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC2_HUMAN (V-type proton ATPase subunit C 2 OS=Homo sapiens GN=ATP6V1C2 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.661e-36 Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKH--SFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 S +W++S P R+ SK S++T +F IP+ +VGT K ++F ES+ ++ + + E +E G L +GV + +++T F WD AKYP PL +VD I +A+IE DLK R A YN +++ L + +K G+L R LS++V ED ++ SE+LVTLL +VPK + W +YE+L+ VVPRS+ L+ ED E L+TVTLF Sbjct: 2 SEFWLISAPGDKENLQALERMNTVTSKSNLSYNT---KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLF 229
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC2_MOUSE (V-type proton ATPase subunit C 2 OS=Mus musculus GN=Atp6v1c2 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.262e-35 Identity = 83/229 (36.24%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 S +W++S P R+ SK + +F IP+ +VGT K ++F ES+ ++ + + E +E G +L +GV + +++T F WD AKYP PL +VD + +A+IE DLK R A Y+ +++ L + ++ +G+L R LS++V ED ++ SE+L+TLL +VPK S W +YE+L+ VVPRS+ L+ EDNE L+TVTLF Sbjct: 2 SEFWLISAPGDKENLQALERMNNVTSKSNLSHNT-KFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIKRMAQSVVEVMEDSKGKAHETLLANGVDLTSFVTHFEWDMAKYPAKQPLVSVVDTLAKQLAQIETDLKSRTAAYSVLKANLENLEKRSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKSSFAQWQKTYESLSDMVVPRSTKLIAEDNEGGLFTVTLF 229
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_ASCSS (V-type proton ATPase subunit C 2 OS=Ascidia sydneiensis samea GN=VATC PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33 Identity = 79/230 (34.35%), Postives = 128/230 (55.65%), Query Frame = 3 Query: 12 SRYWVVSLPVQNSAASVWNRLQEQISKHSFD-TPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT-SEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 S +WV+S P + + RLQ+ + + Y+F+IP L+VGT K ++F E V K+ + E LE SS+LS + ++ RF W+ AKYPT P++ + + + +V +++ DL+ + YNN++S L + RK +GSL +R+LS +VK +D I SE+L T++ VP +W +YE+L YV P+SS LL +D EY L+ ++F Sbjct: 2 SEFWVISAPGDKTPQQTYERLQKATMGSGQNLSNCYKFSIPELKVGTLDSLIGLTDDLGKLDTFCEGVCRKVASYMGEVLEDQKDKLSSNLSAGEGTLVNFMHRFQWNMAKYPTKQPIKSLTEILSKVVTQVDTDLRSKSQAYNNLKSSLQNMERKATGSLLLRNLSQIVKKDDFIDGSEYLRTVIVAVPVALFGEWEKNYESLADYVAPKSSRLLTQDEEYGLFATSIF 231 The following BLAST results are available for this feature:
BLAST of CF417465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417465 ID=CF417465; Name=CF417465; organism=Citrus sinensis; type=EST; length=693bpback to top |