CF417465
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_DROME (V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=1 SV=5) HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29 Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 306 YLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 YLTRF WD AKYP LR I D I + +I+ DLK + YNN++ L + +K++GSL R+L++LVK E I+ SE+L TLL +VPK DWL +YE +T +VPRSS L+ ED +Y L+ VTLF Sbjct: 550 YLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQEDADYCLFNVTLF 679
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_YEAST (V-type proton ATPase subunit C OS=Saccharomyces cerevisiae GN=VMA5 PE=1 SV=4) HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25 Identity = 63/192 (32.81%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 120 FNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 F IP ++G+ K ++ + + KI ++ L S +L ++ +PV YL F W K+ +++++ I ++++ D++ A YN+ ++ L A RK++G L+VR L ++VKPED ++ SEHL T+L VPK D+ SYETL+ VVP S+ ++ ED EY L+ V LF Sbjct: 48 FKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLF 239
BLAST of CF417465 vs. ExPASy Swiss-Prot
Match: VATC_SCHPO (V-type proton ATPase subunit C OS=Schizosaccharomyces pombe GN=SPAPB2B4.05 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 63/233 (27.04%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 12 SRYWVVSLPVQN-SAASVWNRLQEQI--SKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSG--IESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSXKDWLASYETLTSYVVPRSSXLLYEDNEYALYTVTLF 692 S +W++S+P + S A + + ++ + S + + F++P +V + K ++ S KI I+ S ++ + D P++ Y++ F W+ +++ + EI D I + + E+D++ R + S + +KQSG+L+ + L+N+V ED++ S++L + VP K +L SYETLT V+PRS+ L +D+E+ LYTV +F Sbjct: 4 SDFWILSVPSRGGSNADLCDDIERLLVSGSTSLISTVAPFDVPPFKVESLDVLISQSEQLTKQDAQCASAISKISDIIKNTVSSSSGDLKDYFMVQDKSPLE-YVSSFAWNSSRFHMNKTISEISDRITSEIISFENDIRTRQTSFQQASSAFQNMQKKQSGNLSQKSLANIVHEEDVVHGSDYLTNVFIAVPLNLEKQFLNSYETLTDLVIPRSAKKLDQDSEFVLYTVVVF 235 The following BLAST results are available for this feature:
BLAST of CF417465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417465 ID=CF417465; Name=CF417465; organism=Citrus sinensis; type=EST; length=693bpback to top |