CF417469

Overview
NameCF417469
Unique NameCF417469
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.524e-30
Identity = 70/138 (50.72%), Postives = 86/138 (62.32%), Query Frame = 3 
Query:  147 SLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDV--IHAFKPNPKSHI 554
            +L   SRG  LL+D    E +  F RER+PER VHARG  A G F    D S+LT A    A G  TP + RFSTV   RGS +T RD  GFA +FY  EGN+D++GN+IPVFFI D I  P +  +HA KPNP+ H+
Sbjct:   30 TLGAASRGATLLQDLLFTEIIFAFDRERVPERAVHARGTGAHGTFLSYEDWSNLTAASFLSAEGKFTPEMTRFSTVSGARGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHL 167
The following BLAST results are available for this feature:
BLAST of CF417469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA8.524e-3050.72Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-399 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417469 ID=CF417469; Name=CF417469; organism=Citrus sinensis; type=EST; length=626bp
TCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCAGCAAGAAAT
ATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCACAATGCCCC
CTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACAATCACTCCT
TGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTATCATCTGGTG
GAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCA
TGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCCATGATATTT
CTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCT
GTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAGCCCTGAGAC
ACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTA
ATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATCCGTGATGCA
ATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCCAAAGTCTCA
CATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAA
GCTTGTCCACATTTTCCTGGTTCTTT
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