CF417476

Overview
NameCF417476
Unique NameCF417476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.634e-20
Identity = 67/217 (30.88%), Postives = 105/217 (48.39%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654
            +T+ GH   V ++ ++ +   + SAS D  + +W+  + Q    +    A V+T  FSP GQ++A G  D    +++      +DG L   + L+GH+ +V+   + PD  T L ++S D+T  LW I  G            GH   V  V+ S S+ +   S S D+T +LW+       + TF GH G V  V F PD N   + S D T RL+
Sbjct: 1149 KTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWH-----RQDGKL--LKTLNGHQDWVNSLSFSPDGKT-LASASADKTIKLWRIADGKLVKTL-----KGHNDSVWDVNFS-SDGKAIASASRDNTIKLWNRH--GIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349          

HSP 2 Score: 90.1225 bits (222), Expect = 1.293e-17
Identity = 64/220 (29.09%), Postives = 109/220 (49.55%), Query Frame = 1
Query:   10 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTG 669
            L+GH   V S+  + +   I S S D  + +W+    +    +      V + +FSP GQ++A GG D    ++  +     DG L   + ++GH+  V+   + PD   +L ++S D +  LWD T+G           +GH+A V++V  S  + +   +GS D T +LW  R   + ++T +GH+  VN++ F PDG    + S D T +L+ I  G
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSR-DGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTS-----DGTL--LKTITGHEQTVNNVYFSPD-GKNLASASSDHSIKLWDTTSGQLLMTL-----TGHSAGVITVRFS-PDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADG 1271          

HSP 3 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 62/226 (27.43%), Postives = 105/226 (46.46%), Query Frame = 1
Query:   10 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687
            L G++G VY++ +  + + I +A  DG + +W++        +    A +   +F+P G  +A    D    I+ +     +DG     + L GH   V+   + PD  T L ++S D T  LW+++ G            GHT +V  VS S  + ++  S S D T RLWD+  +   +++   H   V +V F PDG+   + S D T +L+    GH L  +
Sbjct: 1360 LAGNSG-VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQGDLIASANADKTVKIWRV-----RDGK--ALKTLIGHDNEVNKVNFSPDGKT-LASASRDNTVKLWNVSDGKFKKTL-----KGHTDEVFWVSFS-PDGKIIASASADKTIRLWDS-FSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTF 1568          

HSP 4 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 54/174 (31.03%), Postives = 82/174 (47.13%), Query Frame = 1
Query:  157 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 678
            V++ + S  GQ++A G LD    +++      +DG L   R L+GH+  V    + PD  T + +   D+T  LW  + G       G  Q   T + +  S  G N     S S D + +LWDT  + + + T  GH   V TV+F PDG     GS+D T +L+  + G  L
Sbjct: 1075 VISISISRDGQTIASGSLDKTIKLWS------RDGRL--FRTLNGHEDAVYSVSFSPDGQT-IASGGSDKTIKLWQTSDGTLLKTITGHEQ---TVNNVYFSPDGKN---LASASSDHSIKLWDT-TSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLL 1232          

HSP 5 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 61/225 (27.11%), Postives = 99/225 (44.00%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 678
            +TL G+   +Y + +T + + I SA+ D  + +W     +    +      V    FSP G+++A    D+   ++N++     DG     + L GH   V    + PD    + ++S D+T  LWD  +G             H   V SV+ +   S M  S S D T +LW +      + TF GH   V +  F PDG    + S+D T +++ I  GH L
Sbjct: 1399 KTLPGNKA-IYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVS-----DGKF--KKTLKGHTDEVFWVSFSPDGKI-IASASADKTIRLWDSFSGNLIKSL-----PAHNDLVYSVNFNPDGS-MLASTSADKTVKLWRSH-DGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI-DGHLL 1606          

HSP 6 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 60/217 (27.65%), Postives = 98/217 (45.16%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654
            +TL GH  +V  ++++ +   + SAS+D  + +WN    +    +K     V   +FSP G+ +A    D    +++  S     GNL   + L  H   V    + PD  + L ++S D+T  LW    G     F     SGH+  V S S S  + R   S S D T ++W  ++    + T   H+  V +  F PDG    +GS D T +++
Sbjct: 1440 KTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFS-----GNL--IKSLPAHNDLVYSVNFNPD-GSMLASTSADKTVKLWRSHDGHLLHTF-----SGHSNVVYSSSFS-PDGRYIASASEDKTVKIW--QIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640          

HSP 7 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 59/256 (23.05%), Postives = 102/256 (39.84%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLW--------DITTG---------------LRTSVFGGEFQSGHTADVLSVSISGSNSRMF-----------VSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTG 669
            +TL GH   V SL ++ +   + SAS D  + +W     +    +K     V    FS  G+++A    D+   ++N +               +GH G V    ++PD +  + ++S D T  LW        ++  G               + T+   G  Q  H+ D   +     N  ++            S + D T ++W  R   +A++T  GH+  VN V F PDG    + S D T +L+++  G
Sbjct: 1233 KTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIE--------LETFTGHSGGVYAVNFLPDSNI-IASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVR-DGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDG 1478          

HSP 8 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 60/224 (26.79%), Postives = 102/224 (45.54%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH 672
            T  GH+G VY++++  + N I SAS D  + +W          +    + V   +F   G  +A  G D    +++      +DG+L   + L G+K       + P  D  + +++ D+T  +W +  G  L+T +       GH  +V  V+ S  + +   S S D+T +LW+     +  +T  GH   V  V F PDG    + S D T RL+D  +G+
Sbjct: 1317 TFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLA-GNSGVYAVSFLHDGSIIATAGADGNIQLWH-----SQDGSL--LKTLPGNKAIYGI-SFTPQGDL-IASANADKTVKIWRVRDGKALKTLI-------GHDNEVNKVNFS-PDGKTLASASRDNTVKLWNVS-DGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGN 1521          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR69_MACFA (WD repeat-containing protein 69 OS=Macaca fascicularis GN=WDR69 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19
Identity = 59/226 (26.11%), Postives = 106/226 (46.90%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            T +GH  ++  L +  +   + + S D    +WN    ++   ++   A +++ +F+ +G  +  G  D    +++     D  G + +   L GH   +S   +  D    ++T S D+TC+LWD T G   +       +GH  ++L  S      ++  + S D TAR++      + +    GHEG ++ + F P GNR  TGS D T R++D +TG  L V
Sbjct:  172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD----ADTGGKVNI---LIGHCAEISSALFNWDCSL-ILTGSMDKTCMLWDATNGKCVATL-----TGHDDEILD-SCFDYTGKLIATASADGTARIFSA-ATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQV 382          

HSP 2 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 59/218 (27.06%), Postives = 105/218 (48.17%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYV--SCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654
            TL+GH+ ++ SL + +  +RI++ S D  ++VW+A T  K + +   CA + +  F+     +  G +D  C +++         N      L+GH   +  SC  Y       + T+S D T  ++   T  R  +   E   GH  ++  +S +   +R+ ++GS D TAR+WD +   + ++   GH   + +  F   GN   TGS D TCR++
Sbjct:  214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDAT-------NGKCVATLTGHDDEILDSCFDYT---GKLIATASADGTARIFSAAT--RKCIAKLE---GHEGEISKISFNPQGNRL-LTGSSDKTARIWDAQ-TGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKDNTCRIW 414          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 68/218 (31.19%), Postives = 104/218 (47.71%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFD 657
            + L GH+G VY   ++ +RN ++S+S+DG + +W+  T       K     V    FSP G     GG D V  ++     TD    L   R+ +GH   V+C +Y P+ + ++ T S D+T  LWD+  G    +F     +GH   + S++ S  N R   +G+ D    LWD       V    GH   V +++F  DG    +GS D T RL+D
Sbjct:  538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW----ATDHYQPL---RIFAGHLADVNCTRYHPNSN-YVATGSADRTVRLWDVLNGNCVRIF-----TGHKGPIHSLTFS-PNGRFLATGATDGRVLLWDIG-HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740          

HSP 2 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 49/142 (34.51%), Postives = 69/142 (48.59%), Query Frame = 1
Query:  277 RMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHG 702
            ++L GH G V    + PD + +L++SS D T  LW + T   T + G     GH   V     S      FVSG  D  ARLW T    + +R F GH   VN  ++ P+ N   TGS D T RL+D+  G+ + ++    G
Sbjct:  538 KILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQTF--TCLVG---YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 671          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.951e-19
Identity = 63/227 (27.75%), Postives = 112/227 (49.34%), Query Frame = 1
Query:    1 CRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWN-----ALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH-EGXVNTVKFFPDGNRFGTGSDDGTCRLFDIR 663
            C+TL GH+G VYS  ++ +   ++S S+D  + +W+     AL S K H        V   +FSP G   A    D    +++ +       ++   R+ +GH   V C  + P+   ++ T S D+TC +WD++TG    +F      GHTA V+S+++   + R   +GS D    +WD     R ++   GH +  + ++ +  +GN   +G  D T R++D++
Sbjct:  518 CKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHP-----VWDVSFSPLGHYFATASHDQTARLWSCD-------HIYPLRIFAGHLNDVDCVSFHPN-GCYVFTGSSDKTCRMWDVSTGDSVRLF-----LGHTAPVISIAVC-PDGRWLSTGSEDGIINVWDIGTGKR-LKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724          

HSP 2 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 63/188 (33.51%), Postives = 88/188 (46.81%), Query Frame = 1
Query:  160 MTCA-FSPTGQSVACGGLDSVCSIFNL-----NSPT------DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687
            M+C  FS   +  A G  DS   I++L     N+P       DKD + P  + L GH G V    + PD + +L++ S D+T  LW + T      +      GH   V  VS S      F + S D TARLW        +R F GH   V+ V F P+G    TGS D TCR++D+ TG  + ++
Sbjct:  469 MSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDED-PTCKTLVGHSGTVYSTSFSPD-NKYLLSGSEDKTVRLWSMDTHTALVSY-----KGHNHPVWDVSFSPLG-HYFATASHDQTARLWSCDHIY-PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLF 647          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 58/226 (25.66%), Postives = 105/226 (46.46%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            T +GH  ++  L +  +   + + S D    +W+    ++ + ++   A +++ +F+ +G  +  G  D    ++      D D    V+ +L GH   +S   +  D    ++T S D+TC LWD T G   +       +GH  ++L  S      ++  + S D TAR++      + +    GHEG ++ + F P GN   TGS D T R++D +TG  L V
Sbjct:  172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW------DADTGRKVN-ILIGHCAEISSASFNWDCSL-ILTGSMDKTCKLWDATNGKCVATL-----TGHDDEILD-SCFDYTGKLIATASADGTARIFSA-ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQV 382          

HSP 2 Score: 84.7297 bits (208), Expect = 5.430e-16
Identity = 58/218 (26.61%), Postives = 106/218 (48.62%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYV--SCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654
            TL+GH+ ++ SL + +  +RI++ S D  ++VW+A T +K + +   CA + + +F+     +  G +D  C +++         N      L+GH   +  SC  Y       + T+S D T  ++   T  R  +   E   GH  ++  +S +   + + ++GS D TAR+WD +   + ++   GH   + +  F   GN   TGS D TCR++
Sbjct:  214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT-------NGKCVATLTGHDDEILDSCFDYT---GKLIATASADGTARIFSAAT--RKCIAKLE---GHEGEISKISFNPQGNHL-LTGSSDKTARIWDAQ-TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414          

HSP 3 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 49/172 (28.49%), Postives = 80/172 (46.51%), Query Frame = 1
Query:  169 AFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            A + +G     G  D  C +++  S  + +        L GH+  V    +       + T S D+TC LW + TG     F      GHTA+++ +S +   S +  +GS D+TA+LWD +     V T  GH   + ++ F   G+R  TGS D T  ++D  TG ++ +
Sbjct:   99 ALNKSGSCFITGSYDRTCKLWDTASGEELN-------TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTF-----RGHTAEIVCLSFN-PQSTLVATGSMDTTAKLWDIQ-NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNI 256          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 67/218 (30.73%), Postives = 104/218 (47.71%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFD 657
            + L GH+G VY   ++ +RN ++S+S+DG + +W+  T       K     V    FSP G     GG D V  ++     TD    L   R+ +GH   V+C ++ P+ + ++ T S D+T  LWD+  G    +F     +GH   + S++ S  N R   +G+ D    LWD       V    GH   V +++F  DG    +GS D T RL+D
Sbjct:  537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW----ATDHYQPL---RIFAGHLADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF-----TGHKGPIHSLTFS-PNGRFLATGATDGRVLLWDIG-HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739          

HSP 2 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 50/142 (35.21%), Postives = 69/142 (48.59%), Query Frame = 1
Query:  277 RMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHG 702
            ++L GH G V    + PD + +L++SS D T  LW + T   T + G     GH   V     S      FVSG  D  ARLW T    + +R F GH   VN  +F P+ N   TGS D T RL+D+  G+ + ++    G
Sbjct:  537 KILYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQTF--TCLVG---YKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG 670          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18
Identity = 56/226 (24.78%), Postives = 106/226 (46.90%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            T +GH  ++  L +  +   + + S D    +W+  + ++   +    A +++ +F  +G  +  G  D    +++ ++             L GH   +S   +  D    ++T S D+TC+LWD T+G   +       +GH  ++L  S      ++  + S D TAR+++     + +    GHEG ++ + F P GNR  TGS D T R++D++TG  L V
Sbjct:  172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV-------HTLIGHCAEISSALFSWDCSL-ILTGSMDKTCMLWDATSGKCVATL-----TGHDDEILD-SCFDYTGKLIATASADGTARVYNA-TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQV 382          

HSP 2 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 62/218 (28.44%), Postives = 108/218 (49.54%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYV--SCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654
            TL GH  ++ SL + +  +RI++ S D  ++VW+A T +K H +   CA + +  FS     +  G +D  C +++  S     G    +  L+GH   +  SC  Y       + T+S D T  +++ TT  R  +   E   GH  ++  +S +   +R+ ++GS D TAR+WD +   + ++   GH   + +  F   GN   TGS D +CR++
Sbjct:  214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS-----GKCVAT--LTGHDDEILDSCFDYT---GKLIATASADGTARVYNATT--RKCITKLE---GHEGEISKISFNPQGNRL-LTGSSDKTARIWDVQ-TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 63/227 (27.75%), Postives = 107/227 (47.14%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLI-TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            T +GH  ++  L +  +   I + S D    +W+  + ++   +    A +++ +F+ TG  +  G  D   S++ + S             L GH+G +S  Q+  + D  LI T+S D++C LWD   G   +       +GH  +VL V+   S  ++  + S D TAR++    + + +    GHEG ++ + F   GNR  T S D T RL+D  TG  L V
Sbjct:  172 TFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRR-------IHTLIGHRGEISSAQF--NWDCSLIATASMDKSCKLWDSLNGKCVATL-----TGHDDEVLDVTFD-STGQLVATASADGTARVYSAS-SRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQV 382          

HSP 2 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = 1
Query:  169 AFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHGE 705
            AF+ +G S   G  D  C +++  S  +          L GH+  V   Q+       + T S D+TC LW   TG     F      GHTA+++ + +    S +  +GS D+TA+LWD +    A+ T  GH   + ++ F   G+R  TGS D T  +++I +G ++       GE
Sbjct:   99 AFNKSGSSFITGSYDRTCKVWDTASGEEL-------HTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTF-----RGHTAEIVCL-VFNPQSTLIATGSMDTTAKLWDIQSGEEAL-TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGE 263          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 69/222 (31.08%), Postives = 109/222 (49.10%), Query Frame = 1
Query:   16 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDI--TTGLRTSVFGGE-----FQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDI 660
            GH   +YSLD++     IVS S D    +W+  T Q    +++    V   A SP  Q +A G LD +  +++++          +   L GHK  V    + PD    L++ S D+T  +W++  T  +  S    E       +GHT  VLSV++S  +SR  +SGS D + + WD +   ++  T  GH+  V +V F PDG +F +GS D   R++ I
Sbjct:  400 GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVSGT--------LVERLEGHKESVYSIAFSPDSSI-LLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVS-PDSRWGLSGSKDRSMQFWDLQTG-QSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 62/227 (27.31%), Postives = 107/227 (47.14%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLI-TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXV 684
            T +GH  ++  L +  +   I + S D    +W+  + ++   +    A +++ +F+ TG  +  G  D   S++ + S             L GH+G +S  Q+  + D  LI T+S D++C LWD   G   +       +GH  +VL V+   S  ++  + S D TAR++    + + +    GHEG ++ + F   GNR  T S D T RL++  TG  L V
Sbjct:  172 TFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRR-------IHTLIGHRGEISSAQF--NWDCSLIATASMDKSCKLWDSLNGKCVATL-----TGHEDEVLDVTFD-STGQLVATASADGTARVYSAS-SRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQV 382          

HSP 2 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 52/179 (29.05%), Postives = 84/179 (46.93%), Query Frame = 1
Query:  169 AFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHGE 705
            AF+ +G S   G  D  C +++  S  +          L GH+  V   Q+       + T S D+TC LW   TG     F      GHTA+++ ++ +   S +  +GS D+TA+LWD +    A+ T  GH   + ++ F   G+R  TGS D T  +++I +G ++       GE
Sbjct:   99 AFNKSGSSFITGSYDRTCKVWDTASGEEL-------HTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTF-----RGHTAEIVCLAFN-PQSTLIATGSMDTTAKLWDIQSGEEAL-TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGE 263          
The following BLAST results are available for this feature:
BLAST of CF417476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
Y2124_ANASP3.634e-2030.88Uncharacterized WD repeat-containing protein all21... [more]
WDR69_MACFA2.356e-1926.11WD repeat-containing protein 69 OS=Macaca fascicul... [more]
TAF5_MOUSE5.248e-1931.19Transcription initiation factor TFIID subunit 5 OS... [more]
TAF5_YEAST8.951e-1927.75Transcription initiation factor TFIID subunit 5 OS... [more]
WDR69_HUMAN1.527e-1825.66WD repeat-containing protein 69 OS=Homo sapiens GN... [more]
TAF5_HUMAN1.527e-1830.73Transcription initiation factor TFIID subunit 5 OS... [more]
WDR69_RAT2.604e-1824.78WD repeat-containing protein 69 OS=Rattus norvegic... [more]
WDR69_XENLA4.442e-1827.75WD repeat-containing protein 69 OS=Xenopus laevis ... [more]
TUP11_SCHPO7.577e-1831.08Transcriptional repressor tup11 OS=Schizosaccharom... [more]
WDR69_XENTR1.688e-1727.31WD repeat-containing protein 69 OS=Xenopus tropica... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-406 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417476 ID=CF417476; Name=CF417476; organism=Citrus sinensis; type=EST; length=728bp
TGTAGGACCTTGCAAGGCCACGCTGGCAAGGTATATTCATTGGACTGGAC
TTCCGAAAGGAATCGAATTGTCAGTGCATCTCAAGATGGAAGGTTAATAG
TGTGGAATGCTCTTACAAGCCAGAAAACTCATGCTATAAAACTGCCTTGT
GCTTGGGTAATGACTTGTGCCTTCTCTCCAACTGGTCAATCTGTTGCCTG
TGGTGGTCTTGATAGTGTTTGCTCCATTTTCAACCTGAATTCTCCTACTG
ACAAGGACGGGAATTTACCAGTATCAAGAATGCTTAGTGGGCACAAGGGT
TATGTGTCCTGCTGTCAGTATGTTCCTGATGAGGACACTCACCTAATTAC
CAGTTCAGGTGACCAAACCTGTGTTTTGTGGGATATTACTACAGGCCTTA
GAACTTCTGTTTTTGGAGGAGAATTTCAGTCTGGGCACACTGCTGATGTG
TTAAGTGTCTCAATTAGTGGTTCAAACTCAAGGATGTTTGTGTCTGGTTC
CTGTGATTCTACTGCCCGATTGTGGGATACTCGTGTTGCAAGTCGAGCAG
TGCGCACATTTCATGGGCATGAGGGANATGTTAACACTGTGAAGTTCTTT
CCAGATGGCAATAGGTTTGGAACTGGCTCAGACGATGGAACTTGCAGATT
ATTTGATATCAGGACTGGGCACCAACTCCNAGTGTATTATCAGCAGCACG
GTGAGAATGAGATCCCACATGTGACGTC
back to top