CF417476

Overview
NameCF417476
Unique NameCF417476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: POF11_SCHPO (F-box/WD repeat-containing protein pof11 OS=Schizosaccharomyces pombe GN=pof11 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 61/228 (26.75%), Postives = 105/228 (46.05%), Query Frame = 1
Query:   10 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQS-VACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYY 690
            L GH+G V  LD+   RN +VS S D  +I+W+    Q    +K+              ++ +     D    ++ L++ +  +  + V   L GH   V+  QY   +   ++T+S D+T   WDITTG    +          A    ++ +  N +  VSGS D T R+++   + + +R   GHE  + TV+F  +  +  +G  DGT R+++  TG Q  V +
Sbjct:  257 LYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD---WQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHV---LRGHLASVNSVQY-SSKTGLIVTASSDRTLRTWDITTGHCIRII--------HAHQRGIACAQYNGKFIVSGSSDLTIRIFEAS-SGKLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRIWNFNTGEQHCVLH 466          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: PFS2_DEBHA (Polyadenylation factor subunit 2 OS=Debaryomyces hansenii GN=PFS2 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 59/220 (26.82%), Postives = 96/220 (43.64%), Query Frame = 1
Query:   31 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLXV 684
            + ++ WT E  R++ AS  G   VWN +T      ++   + +++  +S   + +  G    V   +  N             +++GH   +    + P+ D+  +T S D T  +W+   G            GH  DV S      N  + VSGS D+  +LWD R AS  V T HG +  +   KF P G +    + S D +CR+FD+RT   + V
Sbjct:  125 INTVKWTPEGRRLLVASHSGEFTVWNGMTFNFETIMQAHDSAILSLKYSHNDEWLLSGDQSGVIKYWQTNFNN--------VNIINGHSDGIRDIAFSPN-DSKFLTCSDDSTMKIWNFNNGQEERSL-----VGHHWDVKSADWH-PNLGLIVSGSKDNLIKLWDPR-ASSCVSTLHGFKHTITKTKFQPTGTKRLLASVSRDKSCRIFDLRTMKDILV 328          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: FBW1B_HUMAN (F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 62/222 (27.93%), Postives = 109/222 (49.10%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIR 663
            + L GH G V  L +  +   IV+ S D  + VW+  T +  + +      V+   FS  G  V C   D   +++++ S TD    + + R+L GH+  V+   +   +D +++++SGD+T  +W  +T   +RT        +GH   +  +       R+ VSGS D+T RLWD    +  +R   GHE  V  ++F  D  R  +G+ DG  +++D++
Sbjct:  274 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLMVTCSK-DRSIAVWDMASATD----ITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTL-------NGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 471          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 59/221 (26.70%), Postives = 99/221 (44.80%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRT 666
            + L+GH G VYS  + ++ + ++S S+D  +  W+  +   T   +     V     SP     A G  D    +++       D   P+ R+ +GH   V C ++ P+ + +L T S D+T  LW    G    +F     +GH   VLS+S S  N +   S   D   +LWD   +    +   GH   + ++ F PD     + S D + R++DIR+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF------DRTYPL-RIYAGHLADVDCVKFHPNSN-YLATGSTDKTVRLWSAQQGNSVRLF-----TGHRGPVLSLSFS-PNGKYLASAGEDQRLKLWDL-ASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541          

HSP 2 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 1
Query:  250 DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHG 702
            ++D      ++L GH G V   +++ D  + L++ S D +   WD+ +   T ++      GH   V  V IS   S  F SGS D TARLW     +  +R + GH   V+ VKF P+ N   TGS D T RL+  + G+ + ++    G
Sbjct:  327 EEDNTGTEMKILRGHCGPVYSTRFLADS-SGLLSCSEDMSIRYWDLGSFTNTVLY-----QGHAYPVWDVDISPF-SLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687
            TL GH   V S+ ++     + S+S D  +I+W A   +    +      +   A+S     +     D    ++++ S           + L GH  YV CC + P  +  +I+ S D+T  +W++ TG           S H+  V +V  + S S + VSGS D   R+WD                 V+ VKF P+G    T + D T +L+D   G  L  Y
Sbjct:   36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGK-------CLKTLKGHSNYVFCCNFNPPSNL-IISGSFDETVKIWEVKTGKCLKTL-----SAHSDPVSAVHFNCSGS-LIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 248          

HSP 2 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 58/226 (25.66%), Postives = 104/226 (46.02%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTV--KFFPDGNRF-GTGSDDGTCRLFDIRT 666
            RTL GH  ++  + W+S+ +R+VSAS D  L +W+  + +    +K    +V  C F+P    +  G  D    I+ +     K G     + LS H   VS   +     + +++ S D  C +WD  +G  L+T V            V  V  S  N +  ++ + D+T +LWD     R ++T+ GH+     +   F   G ++  +GS+D    +++++T
Sbjct:   77 RTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEV-----KTGK--CLKTLSAHSDPVSAVHF-NCSGSLIVSGSYDGLCRIWDAASGQCLKTLV------DDDNPPVSFVKFS-PNGKYILTATLDNTLKLWDYS-RGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 286          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 64/232 (27.59%), Postives = 101/232 (43.53%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQH 699
            R  +GH   V S+D++    ++ S S D  L+VW+     + +        V    FSP+G  +A G  D    I+  N   +       S +   H   V    +  D  +  +T+S D+T  +W  +T  +  +F     S H   V     S  + R+ VS S D T +LWD + +   V ++  H G V  V F P G        D T +++D+RT H+L  +YQ H
Sbjct:   13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-------STVFRAHTATVRSVHFCSDGQS-FVTASDDKTVKVW--STHRQKFLFS---LSQHINWVRCAKFS-PDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HRLLQHYQLH 228          

HSP 2 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 56/208 (26.92%), Postives = 90/208 (43.27%), Query Frame = 1
Query:   13 QGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDD 636
            + H   V S+ + S+    V+AS D  + VW+    +   ++     WV    FSP G+ +     D    ++      DK     V      H G+V+   + P   T +  +  D T  +WD+    RT      +Q  H+A V ++S   S + + V+ S DST ++ D  +  R + T HGH+G   TV F   G  F +G  D
Sbjct:  100 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW------DKTSRECVHSYCE-HGGFVTYVDFHP-SGTCIAAAGMDNTVKVWDV----RTHRLLQHYQL-HSAAVNALSFHPSGNYL-VTASSDSTLKILDL-MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 75/281 (26.69%), Postives = 107/281 (38.08%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDT-------------------------------------------RVASRAVRTFH-GHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHGENEI 714
            TL+GH G V SL  + E  N ++S S+D  LI+WN    + ++                                                R L GH   VS C  +  +  + +++S D+T  LW+++TG  T  F      GHT DVLSVS S  N R  VSGS D T +LW+T                                            ++S  ++T H GH G +N V   PDG+   +G  DGT  L+D+     L   Y  +  +EI
Sbjct:   10 TLEGHNGWVTSLATSLENPNMLLSGSRDKSLIIWNLTRDETSYGYP--------------------------------------------KRRLHGHSHIVSDC-VISSDGAYALSASWDKTLRLWELSTGTTTRRF-----VGHTNDVLSVSFSADN-RQIVSGSRDRTIKLWNTLGDCKFTITEKGHTEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLCASGGKDGTTMLWDLNESKHL---YSLNANDEI 236          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 63/218 (28.90%), Postives = 89/218 (40.83%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFD 657
            R+L GH G VY   +  E N ++S S+D  + +W+ LT       +     V    F+P G        D    ++     TD +  L   R+  GH   V C Q+ P+ + ++ T S D+T  LWD  TG           +GH   V S++ S    R   SGS D    +WD    S  V T   H   V T+ F  DG        D    L+D
Sbjct:  444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLW----ATDSNQAL---RVFVGHLSDVDCVQFHPNSN-YVATGSSDRTVRLWDNMTGQSV-----RLMTGHKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNGS-LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646          

HSP 2 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  208 LDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 678
            LD   +  N+    D+ G   V+R L GH G V  C + P+ +  L++ S D T  LW + T      +      GH   V  V  +  +   FVS S D TARLW T  +++A+R F GH   V+ V+F P+ N   TGS D T RL+D  TG  +
Sbjct:  423 LDKESADINVRMLDDRSGE--VTRSLMGHTGPVYRCAFAPEMNL-LLSCSEDSTIRLWSLLTWSCVVTY-----RGHVYPVWDVRFA-PHGYYFVSCSYDKTARLWATD-SNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSV 569          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: NUDF_USTMA (Nuclear distribution protein PAC1 OS=Ustilago maydis GN=PAC1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 63/243 (25.93%), Postives = 111/243 (45.68%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKT-HAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTH-LITSSGDQTCVLWDITTG------------LRTSVFGGEFQSGHTADVLSVS------ISGSNSRMFVS-GSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTG 669
            RTL+GH   V  +D+ S+ N ++S S D  + VW+A    K    ++     V +  F P    +     D    I+  ++          ++ L GH  +V     +P +D   L++ S DQT  +WD+++G            +  ++F           + S+        S S +  FV+ GS D T R+WD+ ++ + ++T  GH+  V  + F P+G    + SDD T RL+D+++G
Sbjct:  158 RTLKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGF-------CTKTLQGHAEWVRSA--IPSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDS-ISGQCLKTLTGHDNWVRGLAFSPNGKSLLSVSDDKTMRLWDLQSG 390          

HSP 2 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 62/249 (24.90%), Postives = 101/249 (40.56%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFP-------------------------DGNRFGTGSDDGTCRLFDIRTGHQL 678
            T+QGH   V  + +    ++I SAS+D  + +W+  T      +K     V    F   G  V     D    +++ N+      +    + L GH   VS  +++P +D +++++S D+T  +W+ +TG  T    G       A+ +  +I   +++  VS S D TAR+WD       V    GHE  V    F P                          G    TGS D T R++D  +G  L
Sbjct:  117 TMQGHRLPVTKVSFHPVFSQIASASEDTTVKLWDWETGDFERTLKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANN------DYKNIKTLQGHDHSVSSVRFLPGDD-YIVSASRDKTIKIWEFSTGFCTKTLQGH------AEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETKVE-LRGHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCL 351          
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14
Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 1
Query:    7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687
            TL GH   V S+ ++     + S+S D  +I+W A   +    +      +   A+S     +     D    ++++ S           + L GH  YV CC + P  +  +I+ S D+T  +W++ TG           S H+  V +V  + S S + VSGS D   R+WD                 V+ VKF P+G    T + D T +L+D   G  L  Y
Sbjct:   36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGK-------CLKTLKGHSNYVFCCNFNPPSNL-IISGSFDETVKIWEVKTGKCLKTL-----SAHSDPVSAVHFNCSGS-LIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 248          

HSP 2 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 57/226 (25.22%), Postives = 104/226 (46.02%), Query Frame = 1
Query:    4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTV--KFFPDGNRF-GTGSDDGTCRLFDIRT 666
            +TL GH  ++  + W+S+ +R+VSAS D  L +W+  + +    +K    +V  C F+P    +  G  D    I+ +     K G     + LS H   VS   +     + +++ S D  C +WD  +G  L+T V            V  V  S  N +  ++ + D+T +LWD     R ++T+ GH+     +   F   G ++  +GS+D    +++++T
Sbjct:   77 KTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEV-----KTGK--CLKTLSAHSDPVSAVHF-NCSGSLIVSGSYDGLCRIWDAASGQCLKTLV------DDDNPPVSFVKFS-PNGKYILTATLDNTLKLWDYS-RGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 286          
The following BLAST results are available for this feature:
BLAST of CF417476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
POF11_SCHPO7.841e-1526.75F-box/WD repeat-containing protein pof11 OS=Schizo... [more]
PFS2_DEBHA1.024e-1426.82Polyadenylation factor subunit 2 OS=Debaryomyces h... [more]
FBW1B_HUMAN1.338e-1427.93F-box/WD repeat-containing protein 11 OS=Homo sapi... [more]
TAF5L_MOUSE1.747e-1426.70TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
WDR5B_PONAB2.282e-1425.99WD repeat-containing protein 5B OS=Pongo abelii PE... [more]
WD51A_BOVIN2.282e-1427.59WD repeat-containing protein 51A OS=Bos taurus GN=... [more]
GBLP_NEUCR2.282e-1426.69Guanine nucleotide-binding protein subunit beta-li... [more]
TAF5_DROME2.980e-1428.90Transcription initiation factor TFIID subunit 5 OS... [more]
NUDF_USTMA2.980e-1425.93Nuclear distribution protein PAC1 OS=Ustilago mayd... [more]
WDR5B_HUMAN3.892e-1425.99WD repeat-containing protein 5B OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-406 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417476 ID=CF417476; Name=CF417476; organism=Citrus sinensis; type=EST; length=728bp
TGTAGGACCTTGCAAGGCCACGCTGGCAAGGTATATTCATTGGACTGGAC
TTCCGAAAGGAATCGAATTGTCAGTGCATCTCAAGATGGAAGGTTAATAG
TGTGGAATGCTCTTACAAGCCAGAAAACTCATGCTATAAAACTGCCTTGT
GCTTGGGTAATGACTTGTGCCTTCTCTCCAACTGGTCAATCTGTTGCCTG
TGGTGGTCTTGATAGTGTTTGCTCCATTTTCAACCTGAATTCTCCTACTG
ACAAGGACGGGAATTTACCAGTATCAAGAATGCTTAGTGGGCACAAGGGT
TATGTGTCCTGCTGTCAGTATGTTCCTGATGAGGACACTCACCTAATTAC
CAGTTCAGGTGACCAAACCTGTGTTTTGTGGGATATTACTACAGGCCTTA
GAACTTCTGTTTTTGGAGGAGAATTTCAGTCTGGGCACACTGCTGATGTG
TTAAGTGTCTCAATTAGTGGTTCAAACTCAAGGATGTTTGTGTCTGGTTC
CTGTGATTCTACTGCCCGATTGTGGGATACTCGTGTTGCAAGTCGAGCAG
TGCGCACATTTCATGGGCATGAGGGANATGTTAACACTGTGAAGTTCTTT
CCAGATGGCAATAGGTTTGGAACTGGCTCAGACGATGGAACTTGCAGATT
ATTTGATATCAGGACTGGGCACCAACTCCNAGTGTATTATCAGCAGCACG
GTGAGAATGAGATCCCACATGTGACGTC
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