CF417476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 59/232 (25.43%), Postives = 102/232 (43.97%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG-XVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQH 699 TL+GH + S+ ++ + + SAS D + +W A + ++ + A+S + + D I+++ S + + L GHK YV + P + +++ S D+ +WD+ TG T + S H+ V V + + + VSGS D T R+WDT + + T +G V+ VKF P+G G+ D T RL+ + Y H Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESG-------KMVKTLKGHKEYVFGVSFNPQSNL-IVSGSFDENVRIWDVNTGECTKMI-----SAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDT-TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGH 257 HSP 2 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 53/224 (23.66%), Postives = 101/224 (45.09%), Query Frame = 1 Query: 4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG---XVNTVKFFPDGNRFGTGSDDGTCRLFDIRT 666 RTL+GH + + W+ + I SAS D + +W+ + + +K +V +F+P + G D I+++N+ ++M+S H V+ + D T +++ S D T +WD TTG + E G + S N + ++G+ D+T RLW + ++T+ GH+ + + G TGS+D +++++T Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG-------ECTKMISAHSDPVTGVHFNRD-GTLVVSGSYDGTVRIWDTTTGQLLNTISTE--DGKEVSFVKFS---PNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQT 292 HSP 3 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 56/184 (30.43%), Postives = 78/184 (42.39%), Query Frame = 1 Query: 157 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITS-SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHGE 705 + + FSP G+ +A D I+ DG R L GHK +S + +D+ LI S S D+T +WD+ +G GH V VS + S + VSGS D R+WD + H V V F DG +GS DGT R++D TG L + G+ Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAY-----DGKF--ERTLEGHKEGISDIAW--SQDSKLICSASDDKTIKIWDVESGKMVKTL-----KGHKEYVFGVSFN-PQSNLIVSGSFDENVRIWDVNTGE-CTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 59/218 (27.06%), Postives = 96/218 (44.04%), Query Frame = 1 Query: 16 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTG 669 GH V S+ ++ N + SAS+D + +W K K A V + FS GQ +A D ++++ L H +V C ++ PD +++ S D+T +WD T + F S A+ + + SG+ S D T ++WD RV ++ ++ + H G VN + F P GN T S DGT ++ D+ G Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR-------FLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTNKQCVNNFS---DSVGFANFVDFNPSGT---CIASAGSDQTVKVWDVRV-NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 260
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 60/216 (27.78%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLF 654 +L GH V + + S R+V+ S G L +W+ ++ + A + + F P G+ +A G +DS ++++ + G + GH V C + PD L ++S D T LWD+ G + F + HT+ V V N + SGS D T +LWD + + G G V +V F PDG+ +GS++ T R++ Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR----RKGCV---FRYKGHTQAVRCLAFSPD-GKWLASASDDSTVKLWDLIAGKMITEF-----TSHTSAVNVVQFH-PNEYLLASGSADRTVKLWDLE-KFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVY 257
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WD51A_HUMAN (WD repeat-containing protein 51A OS=Homo sapiens GN=WDR51A PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 63/232 (27.16%), Postives = 99/232 (42.67%), Query Frame = 1 Query: 4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQH 699 R +GH V +D++ ++ S S D L+VW+ + + V FSP+G +A G D I+ N + S + H V + D + +T+S D+T +W T + +F S H V S + R+ VS S D T +LWD + + V ++ H G V V F P G D T +++D+RT H+L +YQ H Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-------STVFRAHTATVRSVHFCSDGQS-FVTASDDKTVKVW--ATHRQKFLFS---LSQHINWVRCAKFS-PDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HRLLQHYQLH 228
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 61/232 (26.29%), Postives = 99/232 (42.67%), Query Frame = 1 Query: 4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQH 699 R +GH V +D++ + S S D L++W+ + + V FSP+G +A G D I+ N + S + H V + D + L+T+S D+T +W +T + +F + H V S + R+ VS S D T +LWD + + + ++ H G V V F P G D T +++D RT H+L +YQ H Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-------STVFRAHTATVRSVHFCSDGQS-LVTASDDKTVKVW--STHRQRFLFS---LTQHINWVRCAKFS-PDGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART-HRLLQHYQLH 228
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 56/229 (24.45%), Postives = 100/229 (43.67%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGX--VNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687 TL GH+ + S+ ++ + S++ D +I+W A + + + A+S + D ++++ S + L GH +V CC + P + +++ S D++ +W++ TG S H+ + +V N + VSGS D R+WD + + +RT EG V+ VKF P+G T + D T +L+D G L Y Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGK-------CLKTLKGHSDFVFCCDFNPPSNL-IVSGSFDESVKIWEVKTGKCLKTL-----SAHSDPISAVHFH-CNGSLIVSGSYDGLCRIWDA-ASGQCLRTL-ADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTY 246 HSP 2 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 58/226 (25.66%), Postives = 105/226 (46.46%), Query Frame = 1 Query: 4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTV--KFFPDGNRF-GTGSDDGTCRLFDIRT 666 +TL GH+ ++ + W+S+ +R+VSAS D L +W+ + + +K +V C F+P + G D I+ + K G + LS H +S + + +++ S D C +WD +G LRT G V V S N + ++ + DST +LWD R ++T+ GH+ + F G ++ +GS+D +++++T Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV-----KTGK--CLKTLSAHSDPISAVHF-HCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG------NPPVSFVKFS-PNGKYILTATLDSTLKLWDYS-RGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQT 284
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 66/223 (29.60%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL----PCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNR---FGTGSDDGTCRLF 654 T GH +YSLD++S+ IVS S D + +W+ + + P V + A SP G+ VA G LD++ +++ + GH V + PD + L + S D++ LWD++ S F +GH VLSV+ S S +SGS D + + WD R + + GH+ V +V P N F TGS D RL+ Sbjct: 364 TFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGY-------FLERYEGHLDSVYSVAFSPDGKS-LASGSLDKSLKLWDLSGSRSRSRCRATF-NGHKDFVLSVAFSPDGS-WLISGSKDRSVQFWDPRNGTTHM-MLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 64/235 (27.23%), Postives = 102/235 (43.40%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL----DSVCSIFNLNSPTDKDGNLPVSRM---LSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGX-VNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVY 687 TL+GH + S ++ + ++S D + +WN H M C + TG + + DS C + + T K + SRM L GH YV CC + P + + +++ S D++ +WD+ TG+ H+ V +VS + S + SGS D R+WDT + ++T E V VKF P+G + D T +L+D G L Y Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM-----DH---------MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKTGMCIKTL-----PAHSDPVSAVSFNRDGS-LIASGSYDGLVRIWDT-ANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY 294
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 61/168 (36.31%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 202 GGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLXVYYQQHGE 705 G DS I++L + G L R LSGH V + +D LIT S D+T +W+ TG S + GH+ VLSV S ++ VSGS D T ++W V SR T GH VN VK P + SDD T R++DIRT L V+ G+ Sbjct: 318 GSYDSTIGIWDLFT-----GKL--IRRLSGHSDGVKTLYF---DDRKLITGSLDKTIRVWNYITGECISTY-----RGHSDSVLSVD---SYQKVIVSGSADKTVKVW--HVESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQ 465
BLAST of CF417476 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 66/227 (29.07%), Postives = 104/227 (45.81%), Query Frame = 1 Query: 4 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG-DQTCVLWDITT-GLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGXVNTVKFFPDGNRF----GTGSDDGTCRLFDIRT 666 R L GH+ V + + + +SAS D + +W+ + TH + V++ + SP + V G D I+N+ GN + GH +VSC ++ P+ D S+G D+ +WD+ T LRTS + GHT V +V+IS S + SG D T LWD ++ + +N + F P NR+ TGS + R+FD+ T Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI------IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY------GHTGYVSAVTISPDGS-LCASGGRDGTLMLWDLNESTHLYSL--EAKANINALVFSP--NRYWLCAATGS---SIRIFDLET 263 HSP 2 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 63/232 (27.16%), Postives = 98/232 (42.24%), Query Frame = 1 Query: 7 TLQGHAGKVYSLDWTSERNRIV-SASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM-FVSGSCDSTARLWDTRVASRAVRTFH-GHEGXVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 678 TL+GH+G V SL E I+ S S+D +I+WN + + + +V CA S D +++L + GH V PD + +++ S D+T +W+I + ++ G GH+ V V S + + FVS D ++WD S +RT H GH G V+ V PDG+ +G DGT L+D+ L Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGE-------CTHQFVGHTSDVLSVSISPD-NRQVVSGSRDKTIKIWNIIGNCKYTITDG----GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS--LRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHL 227 The following BLAST results are available for this feature:
BLAST of CF417476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417476 ID=CF417476; Name=CF417476; organism=Citrus sinensis; type=EST; length=728bpback to top |