CF417495

Overview
NameCF417495
Unique NameCF417495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 6.270e-39
Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR   NE +E V +K  +AL  G+KVI C+GETLE+++   T++VV  Q +A+ ++V  W+N+V+AYEPVWAIGTG  AT   AQ++H  +R++L    S ++A + RI+YGGS NG N      + DVDGFL
Sbjct:   94 GHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFL 230          

HSP 2 Score: 33.8834 bits (76), Expect = 6.270e-39
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDIIKS 461
            F VGGASLKPEF+DII S
Sbjct:  229 FLVGGASLKPEFVDIINS 246          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.995e-38
Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR   +E ++ V +K  +AL QGL VI C+GETLE+++AG T++VV  Q  A+   V  W+N+V+AYEPVWAIGTG  AT   AQ++H  +R +L      + A  TRI+YGGS NGAN      + DVDGFL
Sbjct:   94 GHSERRTYFHEDDKIVAEKTKFALDQGLGVILCIGETLEEKKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSYLAEKLGKDTAEKTRILYGGSANGANAGTFKDKADVDGFL 230          

HSP 2 Score: 33.8834 bits (76), Expect = 3.995e-38
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDIIKS 461
            F VGGASLKPEF+DII S
Sbjct:  229 FLVGGASLKPEFVDIINS 246          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 8.770e-38
Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR    E NE V DKVA A++ G  VIAC+GETL++RE+G T  VV  Q  AIA ++  + W+ +V+AYEPVWAIGTGKVATP QAQE H  +R W+ +    ++A   RI+YGGSVNG N + L  Q DV+GFL
Sbjct:   94 GHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFL 232          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.498e-37
Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR I+ E NE    K   AL +G+ VI C GETL++R+A +TMEV  AQ +A+   +      W N+V+AYEPVW+IGTG VATP QA+EVH  LRKW       E A   RIIYGGS NG+NC++L   P++DGFL
Sbjct:   95 GHSERRRIMGETNEQSAKKAKRALDKGMTVIFCTGETLDERKANNTMEVNIAQLEALKKEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFL 235          

HSP 2 Score: 26.9498 bits (58), Expect = 1.498e-37
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDII 455
            F VGGASLKPEF  +I
Sbjct:  234 FLVGGASLKPEFTTMI 249          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.499e-37
Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR I  E +E++ DK  YAL  GL VI C+GET+++++AG T++VV +Q   +  ++  WSN+V+AYEPVWAIGTG  AT   AQ++H E+R +L      + A   RIIYGGSVNG N      + DVDGFL
Sbjct:   94 GHSERRTINKESSEWIADKTKYALDNGLDVILCIGETIDEKKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFL 229          

HSP 2 Score: 33.8834 bits (76), Expect = 1.499e-37
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDIIKS 461
            F VGGASLKPEF+DII S
Sbjct:  228 FLVGGASLKPEFVDIINS 245          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_TRYCR (Triosephosphate isomerase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.954e-37
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERRL   E NE V +KVA A + G  VI CVGET E+REAG T  VV  Q  A+A ++S  +WS +V+AYEPVWAIGTGKVATP QAQEVH  LR+W+ +    +IAA  RI+YGGSV   N + L    D++GFL
Sbjct:   95 GHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFL 233          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 3.333e-37
Identity = 75/137 (54.74%), Postives = 96/137 (70.07%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR I+ E +EF+ +K  +AL  G+KVI C+GETLE+R+ G T++V A Q  A++  VS WSNIV+AYEPVWAIGTG  ATP  A+E H  +R  L  +   E A  TRI+YGGSVNG N K+   + +VDGFL
Sbjct:   94 GHSERRTIIKESDEFIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFL 230          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.243e-36
Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GHSERR I+ E +E    K   AL +G+ VI CVGETL++R+A  TMEV  AQ +A+   +      W  +V+AYEPVW+IGTG VATP QA+EVH  LRKW       E A   RIIYGGS NG+NC++L   P++DGFL
Sbjct:   95 GHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFL 235          

HSP 2 Score: 27.7202 bits (60), Expect = 1.243e-36
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDII 455
            F VGGASLKPEF+ +I
Sbjct:  234 FLVGGASLKPEFMTMI 249          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.031e-35
Identity = 69/137 (50.36%), Postives = 89/137 (64.96%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GH ERR   +E +E V +K+  +L   LK + C GE+LEQRE   T+EV+  Q KA  D + ++ N++LAYEP+WAIGTGK ATP QAQ VH E+RK +      + A   RI+YGGSVN  NC  L  Q D+DGFL
Sbjct:   94 GHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFL 230          

HSP 2 Score: 30.0314 bits (66), Expect = 1.031e-35
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDIIKSA 464
            F VG ASLK  F+DIIKSA
Sbjct:  229 FLVGNASLKESFVDIIKSA 247          
BLAST of CF417495 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.031e-35
Identity = 69/137 (50.36%), Postives = 89/137 (64.96%), Query Frame = 2
Query:    2 GHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 412
            GH ERR   +E +E V +K+  +L   LK + C GE+LEQRE   T+EV+  Q KA  D + ++ N++LAYEP+WAIGTGK ATP QAQ VH E+RK +      + A   RI+YGGSVN  NC  L  Q D+DGFL
Sbjct:   94 GHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFL 230          

HSP 2 Score: 30.0314 bits (66), Expect = 1.031e-35
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  408 FWVGGASLKPEFIDIIKSA 464
            F VG ASLK  F+DIIKSA
Sbjct:  229 FLVGNASLKESFVDIIKSA 247          
The following BLAST results are available for this feature:
BLAST of CF417495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_KLULA6.270e-3948.91Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_CANGA3.995e-3850.36Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPIS_TRYBB8.770e-3855.40Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPI2_GIALA1.498e-3753.19Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPIS_YARLI1.499e-3750.36Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_TRYCR1.954e-3756.83Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_CANAL3.333e-3754.74Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPI1_GIALA1.243e-3652.48Triosephosphate isomerase OS=Giardia lamblia PE=1 ... [more]
TPIS_PLAFA1.031e-3550.36Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF71.031e-3550.36Triosephosphate isomerase OS=Plasmodium falciparum... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-425 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417495 ID=CF417495; Name=CF417495; organism=Citrus sinensis; type=EST; length=636bp
TGGTCATTCTGAAAGGAGACTCATTTTGAATGAATTAAATGAGTTTGTTG
GGGATAAGGTTGCATATGCACTTTCTCAAGGTTTGAAGGTGATTGCTTGT
GTTGGTGAGACACTTGAGCAGCGTGAAGCAGGATCTACTATGGAAGTTGT
TGCTGCACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGGTCAAACA
TTGTTTTGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCC
ACTCCAGCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTCT
TGCAAACACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAG
GATCCGTAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTT
GACGGATTTTTGGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACA
TCATCAAATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGCG
CAGTTTGCTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTG
GTATAATTTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAAC
CTTTTTTTAAACTTTTTTAATTATCTTTGTTTCCTA
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