CF417507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 326.25 bits (835), Expect = 3.513e-93 Identity = 154/175 (88.00%), Postives = 164/175 (93.71%), Query Frame = 1 Query: 10 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 MATS IQQSAFAGQT L+ NE VRKVG +GGR++MRRT+KS P+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQSILAIWACQVVLMG VEGYR Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYR 174 HSP 2 Score: 37.3502 bits (85), Expect = 3.513e-93 Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 552 LVKDLTHFXPGGAFDPLGLADDPDQF 629 L + L PGGAFDPLGLA+DP+ F Sbjct: 180 LGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.023e-86 Identity = 130/176 (73.86%), Postives = 149/176 (84.66%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 A +A+ +A AGQ+ ++ NE RKV R+TMRRTV + S IWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 3 AATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 178 HSP 2 Score: 72.7886 bits (177), Expect = 1.023e-86 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDPD FAELKVKE+KNGRLAMFSMF Sbjct: 193 PGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMF 228
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.740e-86 Identity = 136/178 (76.40%), Postives = 145/178 (81.46%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVK----STPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 +T AI +A AG KVG GRITMR+TV + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR Sbjct: 4 STMAISSTAMAGTPI---------KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172 HSP 2 Score: 72.0182 bits (175), Expect = 1.740e-86 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF Sbjct: 187 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 222
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 5.039e-86 Identity = 135/176 (76.70%), Postives = 150/176 (85.23%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT A+ +FAGQ A++ S ++ GRITMR+ V KS P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 4 ATMALSSPSFAGQ-AVKLSPSASE---ISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 175 HSP 2 Score: 69.707 bits (169), Expect = 5.039e-86 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMF Sbjct: 190 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF 225
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 2.482e-85 Identity = 133/178 (74.72%), Postives = 149/178 (83.71%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 +T A+ S FAG+ A++ S G GR+TMR+T K+ P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 4 STMALSSSTFAGK-AVKLSPSSSEITG---NGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 71.2478 bits (173), Expect = 2.482e-85 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMF Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 227
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 3.238e-85 Identity = 132/178 (74.16%), Postives = 146/178 (82.02%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT AI S+FAG+ S+ + G+ TMR+TV K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 4 ATMAISSSSFAGKAVNVPSSS-----QITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176 HSP 2 Score: 71.2478 bits (173), Expect = 3.238e-85 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMF Sbjct: 191 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 226
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.224e-85 Identity = 132/176 (75.00%), Postives = 144/176 (81.82%), Query Frame = 1 Query: 10 MATS-AIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 MATS A S F+GQ L+ NE RKVG + M K+ SIWYG DRP YLGPFS PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR Sbjct: 1 MATSTAALTSTFSGQQ-LKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 175 HSP 2 Score: 72.0182 bits (175), Expect = 4.224e-85 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF Sbjct: 190 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 225
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 5.510e-85 Identity = 131/176 (74.43%), Postives = 147/176 (83.52%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKS--TPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT A+ +FAGQ A++ S G GR++MR+TV S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR Sbjct: 4 ATMALSSPSFAGQ-AVKLSPSAPEITG---NGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 175 HSP 2 Score: 69.707 bits (169), Expect = 5.510e-85 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMF Sbjct: 190 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF 225
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 9.374e-85 Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT A+ S+FAG+ A++ S G G++TMR+TV K+ P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 4 ATMALSSSSFAGK-AVKLSPSSSEITG---NGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 67.781 bits (164), Expect = 9.374e-85 Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+DP+ FAELKVK +KNGRLAMFSMF Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMF 227
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 2.081e-84 Identity = 129/177 (72.88%), Postives = 145/177 (81.92%), Query Frame = 1 Query: 16 TSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 T A+ S+FAG+ S+ + G++TMR+TV K+ P S WYGPDR KYLGPFS + PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR Sbjct: 5 TMALSSSSFAGKAVKLSSSSSE----ITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 69.707 bits (169), Expect = 2.081e-84 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMF Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF 227 The following BLAST results are available for this feature:
BLAST of CF417507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417507 ID=CF417507; Name=CF417507; organism=Citrus sinensis; type=EST; length=687bpback to top |