CF417507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.243e-82 Identity = 127/178 (71.35%), Postives = 142/178 (79.78%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT A+ S FAG+ + + G+ TMR+T K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVW KAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR Sbjct: 4 ATMALSSSTFAGKVVKLSPSSSE----ITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR 177 HSP 2 Score: 68.5514 bits (166), Expect = 3.243e-82 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+DP+ FAELKVKE KNGRLAMFSMF Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMF 227
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.518e-82 Identity = 127/182 (69.78%), Postives = 146/182 (80.22%), Query Frame = 1 Query: 10 MATSAIQQSAFAGQTALRQS---NEFVRKVGVADGGRITMRRTVKS----TPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 MA S+ A + T + N +++G A R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYR Sbjct: 1 MAASSSSSMALSSPTLAGKQLKLNPSSQELGAA---RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 179 HSP 2 Score: 72.0182 bits (175), Expect = 5.518e-82 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF Sbjct: 194 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 229
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.225e-81 Identity = 130/179 (72.63%), Postives = 144/179 (80.45%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 +T A+ +AFAG+ S+ F R+TMR+T K+ P S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR Sbjct: 4 STMALSSTAFAGKAVNVPSSSFGE-------ARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 175 HSP 2 Score: 65.855 bits (159), Expect = 1.225e-81 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ F ELKVKELK GRLAM SMF Sbjct: 190 PGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMF 225
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 1.225e-81 Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 AT A+ A AG+ A + E GRITMR++ K P S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR Sbjct: 4 ATMALSSPALAGKAAAKVFGE----------GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYR 171 HSP 2 Score: 71.2478 bits (173), Expect = 1.225e-81 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMF Sbjct: 186 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 221
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 7.872e-81 Identity = 120/145 (82.76%), Postives = 130/145 (89.66%), Query Frame = 1 Query: 106 GRITMRRTVKSTPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 GR++MR+T T S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFSEGGLDYLGN +LIHAQSILAIWA QV+LMG VEGYR Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYR 155 HSP 2 Score: 68.9366 bits (167), Expect = 7.872e-81 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPL LADDP+ FAELKVKE+KNGRLAMFSMF Sbjct: 170 PGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMF 205
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 3.874e-80 Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 109 RITMRRTVK-----STPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 RITMR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR Sbjct: 29 RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYR 175 HSP 2 Score: 72.4034 bits (176), Expect = 3.874e-80 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMF Sbjct: 190 PGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 225
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.600e-78 Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 1 Query: 136 STPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 ++ S W+GPD KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYR Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 138 HSP 2 Score: 67.0106 bits (162), Expect = 1.600e-78 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+ P+ FAELKVKELKNGRLAMFSMF Sbjct: 153 PGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMF 188
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.624e-78 Identity = 122/177 (68.93%), Postives = 140/177 (79.10%), Query Frame = 1 Query: 16 TSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 T ++ S+FAG+ + + +G A R+ MR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFS+GGLDYLGNP+L+HAQS+LAIWACQVVLMG VEGYR Sbjct: 5 TMSLSSSSFAGKAVKNLPSSAL--IGDA---RVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYR 176 HSP 2 Score: 65.855 bits (159), Expect = 4.624e-78 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLA+ P FAELKVKE+KNGRLAMFSMF Sbjct: 191 PGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMF 226
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.744e-74 Identity = 121/176 (68.75%), Postives = 137/176 (77.84%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 534 +T A+ S+ AGQ + ++GV GR++MR+T T S WYGPDR KYLGPFS + PSYLTGEF G LSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QV+LMG VEGYR Sbjct: 4 STMALSSSSLAGQAMKLAPS--TPELGV---GRVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYR 166 HSP 2 Score: 69.707 bits (169), Expect = 1.744e-74 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 579 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 PGG+FDPLGLADDP+ AELKVKELKNGRLAMFSMF Sbjct: 181 PGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMF 216
BLAST of CF417507 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 2.273e-74 Identity = 120/177 (67.80%), Postives = 131/177 (74.01%), Query Frame = 1 Query: 13 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSTPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGY 531 AT AI A G+ A + F GRITMR+T K P S WYG DR YLGP S PSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIH RWA+ LGCVFPE+L++NGVKFGE VWFKAG+QIFSEGGL + GNP+L+HAQSILAIWACQVVLMG VEGY Sbjct: 4 ATMAITSRALVGKPAAGTRDVFGE-------GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGY 173 HSP 2 Score: 67.781 bits (164), Expect = 2.273e-74 Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = 3 Query: 582 GGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 686 GG+FDPLGL DDP++FAELKVKE+KNGRLAMFSMF Sbjct: 190 GGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMF 224 The following BLAST results are available for this feature:
BLAST of CF417507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417507 ID=CF417507; Name=CF417507; organism=Citrus sinensis; type=EST; length=687bpback to top |