CF417556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.346e-71 Identity = 123/235 (52.34%), Postives = 169/235 (71.91%), Query Frame = 1 Query: 4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708 +W+ KG+NI Y+ R RTGYKAG LK + YV+ E+VAIFDADF+P D+L+ +P+ + ++ LVQARW FVN DE LLTR+Q ++L +HF+VEQ+V FFGFNGTAGVWRI A+ E+GGW +RTTVEDMD+AVRA L GWKF+YL D++V E+P +++A++ QQHRW GP LFR + + I K+ WKK +I FF +RK+I +F+ +CV+LP+T+ Sbjct: 282 KWSQKGVNIIYRHRLVRTGYKAGNLKSAMSCDYVEAYEFVAIFDADFQPNSDFLKLTVPHFKEKPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFR-LCLRSILTSKIAMWKKANLILLFFLLRKLILPFYSFTLFCVILPITM 515
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70 Identity = 124/236 (52.54%), Postives = 169/236 (71.61%), Query Frame = 1 Query: 1 QRWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708 Q+W +G+ I Y+ R RTGYKAG LK + YVK E+VAIFDADF+P D+L++ +P+ N ++ALVQ RW FVN DE LLTR+Q ++L +HF+VEQ+V FFGFNGTAGVWRI A+ + GGW +RTTVEDMD+AVRA L GWKF+YL D++ ELP +++A++ QQ+RW GP LFR +I+R+ KV KK +I+ FF +RK+I +F+ +CV+LPLT+ Sbjct: 275 QKWQQRGVRIVYRHRLIRTGYKAGNLKAAMNCEYVKDYEFVAIFDADFQPPADFLKKTVPHFKGNEELALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRS-KVSAAKKANMIFLFFLLRKLILPFYSFTLFCVILPLTM 509
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: BCSA_XANAC (Cellulose synthase catalytic subunit [UDP-forming] OS=Xanthomonas axonopodis pv. citri GN=bcsA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 55/194 (28.35%), Postives = 82/194 (42.27%), Query Frame = 1 Query: 22 INIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFG-------------FNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFR 564 + I Y R N KAG + LK+ +YVAIFD D P +L+ A+ + + ++ +ALVQ F + D E +LD H KV E F+G F G+ V + A+ E GG T ED A++ +G++ YL Q + Q+ RW+ G A + R Sbjct: 206 VGINYVTRTNNAHAKAGNINAALKKC---SGDYVAIFDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPF------ERNLDTHGKVPNE----GELFYGLLQDGNDQWNATFFCGSCAVIKRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQAAGLATESLSGHVAQRIRWARGMAQIAR 386 The following BLAST results are available for this feature:
BLAST of CF417556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417556 ID=CF417556; Name=CF417556; organism=Citrus sinensis; type=EST; length=711bpback to top |