CF417582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.565e-75 Identity = 134/212 (63.21%), Postives = 167/212 (78.77%), Query Frame = 1 Query: 28 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 LFEAL++ ++EEM+R+ V ++GED+GHYGGSYKVT+GL KYG RV+DTPIAE SF G +GAA TGL P+VEGMNM F+LLA++QISNN GML TSGG F QLGAEHSQRLESYFQS+PG+Q+V CSTPYNAKGL+K+AIRS+NP++ EHVLLYNLK +PD +Y+ LE+AE+VR G +T+LTYSR RY+V+ Sbjct: 6 LFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLKGEVPDNDYLLPLEKAELVREGSDITVLTYSRQRYNVI 217
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.381e-43 Identity = 88/214 (41.12%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 E+ + +A+ L+EE+ RD V +MGE+V Y G+YK+TKGL DKYG R++DTPI E F G+G+GAAM G RPI+E M F + A + I N+ HY SGG+ +GA+HSQ +++ S+PG+++VA + + +GL+K+AIR +NPV+ E LLYN L ++ D+EY+ + +A++ R G+ VTI+ +SR+ Sbjct: 28 EVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRI 241
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 5.767e-43 Identity = 88/206 (42.72%), Postives = 133/206 (64.56%), Query Frame = 1 Query: 28 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPD-EEYICNLEEAEMVRPGEHVTILTYS 642 L EALR+ + EEM RD V VMGE+V Y G+YKVT+GL ++G RV+DTPI+E F+G+G+GAAM GLRP++E M M F + A + I N+ HY SGGQ ++GA+H+Q ++ ++PG+ ++A +AKGL+KAAIRS++PV+ E LLY +P ++++ + +A ++R G+ VTI++YS Sbjct: 141 LREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFVLPIGKARIIREGKDVTIVSYS 346
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.191e-42 Identity = 88/214 (41.12%), Postives = 132/214 (61.68%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 E+ + +AL ++EEM DP V VMGE+VG Y G+YK+TKGL +KYG RV DTPI E FTG+G+GAA GL+P+VE M F + A + I N+ +Y S GQ +GA+HSQ +++ S+PG++++A + +A+GL+KAAIR +PV+ E+ LLY + E D + + +A++ R G+ VTI+T+S+M Sbjct: 35 EMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKM 248
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.855e-41 Identity = 83/203 (40.89%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTY 639 +A+ ++EEM+RD V V+GEDVG GG +K T GL +++G+ RV+DTP+AE++ G+GIGAAM G+RPI E F++ A NQI + + Y S ++ HSQ +E+ F + PG+++V STPY+AKGL+KAA+R E+PV+ FEH Y L K +P ++Y+ + +A++ R G+ +T++TY Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKGEVPADDYVLPIGKADVKREGDDITVITY 210
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.423e-41 Identity = 87/215 (40.47%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 + + +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++KE +P+E+Y ++ +A + R G+ +T++ Y + V+ Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVL 218
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.397e-41 Identity = 87/215 (40.47%), Postives = 130/215 (60.47%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 + + +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F+Q+ + L Y SGGQFT + G HSQ E++F G+++VA STPY+AKGL+KAAIR E+PV+ E LY ++KE +P+E+Y + +A + R G+ +T++ Y + V+ Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVL 218
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.207e-41 Identity = 86/208 (41.35%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYS 642 ++ + EALR+ ++EEM RD V V+GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY +PD +A++++ G +VTI+T+S Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPDIIEPIPFSKAKILKEGSNVTIVTFS 209
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.207e-41 Identity = 86/208 (41.35%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYS 642 ++ + EALR+ ++EEM RD V V+GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY +PD +A++++ G +VTI+T+S Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPDIIEPIPFSKAKILKEGSNVTIVTFS 209
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.207e-41 Identity = 86/208 (41.35%), Postives = 126/208 (60.58%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYS 642 ++ + EALR+ ++EEM RD V VMGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + +PG+++VA + + KGLM AIR +NPVI E+ +LY +P+ +A+++R G VTI+T+S Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPETIEPIPFGQAKILREGSSVTIVTFS 209 The following BLAST results are available for this feature:
BLAST of CF417582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417582 ID=CF417582; Name=CF417582; organism=Citrus sinensis; type=EST; length=663bpback to top |