CF417582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.275e-38 Identity = 84/214 (39.25%), Postives = 127/214 (59.35%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +AL L+ EM D V +MGE+VG Y G+YKVTKGL +KYG RVLDTPI E FTG+G+GAA GL+P+VE M F + A + I N+ +Y S GQ + +GA+HS S++ S PG++++ + +A+GL+KAAIR +PV+ E+ LLY + + D + + +A++ R G+ VTI +S+M Sbjct: 25 QMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKM 238
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.122e-37 Identity = 79/207 (38.16%), Postives = 123/207 (59.42%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYS 642 +AL L+EE+ RD V ++GE+V Y G+YK++KGL KYGD R+ DTPI E + G+ +GAAM GLRPI E M+M F + + I N+ HY S G+F + +HSQ ++F PG+++V +A+GL+KAA+R +NPVI E+ +LY +K + E +++ +A++ RPG+ +TI++ S Sbjct: 38 DALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLS 244
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 3.620e-37 Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 37 ALREGLEEEMDRDPHVCVMGEDV----------GHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 A+ E +++EM RDP V ++GED+ +GG VTKGL K+GD R+LDTP++E+++ G IGAA G+RPI E M + F+ + F+QI N Y GG+ + A+HSQ L F IPG+++V STPY+ KGL+ AIR +PVI EH LY L+ +P+ Y EA +VR G+ V+I+TY M + + Sbjct: 10 AINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHGD-RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAETPVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRAL 227
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.728e-37 Identity = 80/209 (38.28%), Postives = 123/209 (58.85%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTIL 633 E+ + +AL +EEEM RD V ++GE+V Y G+YK+++GL DK+G RV+DTPI E FTG+ GAA GLRPI E M F + A + I N+ Y SGG + A+HSQ ++ SIPG+++V+ + +A+GL+KAAIR NPV++ E+ +LY + + E+++ A++ RPG+ +TI+ Sbjct: 37 EMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIV 245
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.828e-36 Identity = 74/211 (35.07%), Postives = 121/211 (57.35%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L E+ D +V V GEDVG GG ++ T+GL ++G+ RV DTP+AE+ G+ +G + G RP++E GF+ + +S + Y SGG++T H+ LE PGI++V STPY+AKGL+ +AIR +PV+ EH+ LY + ++ +P+EEY L +A++ R G ++I+TY M Sbjct: 3 QMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKREGTDLSIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 71/211 (33.65%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 71/211 (33.65%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F++++ + SGG H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213 The following BLAST results are available for this feature:
BLAST of CF417582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417582 ID=CF417582; Name=CF417582; organism=Citrus sinensis; type=EST; length=663bpback to top |