CF417583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.014e-16 Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.436e-16 Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMALSSS F GKAVN+ PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.655e-16 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 M STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.997e-16 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 36 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 A S+MALSS S GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFS Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.306e-15 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPFS 215 MA+STMALSS S GKAV L P+ +E+ GRI+MRKT K +V S SPWYGPDRVKYLGPFS Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.227e-15 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFS 215 MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFS Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.909e-15 Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMALSSS F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYGPDRVKYLGPFS Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFS 64
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15 Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFS 215 MA +TMA+SSS F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA STMALSS + GKAV +APS +EL GR+SMRKT VS SPWYGPDRVKYLGPFS Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFS 61
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.480e-15 Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFS Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFS 62 The following BLAST results are available for this feature:
BLAST of CF417583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417583 ID=CF417583; Name=CF417583; organism=Citrus sinensis; type=EST; length=217bpback to top |