CF417583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.105e-14 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFS 215 MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFS Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFS 63
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.357e-14 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 63 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFS Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFS 52
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.644e-13 Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 MA +TMALSSS F GKAV S +E+ R+SMRKT + GSPWYGPDRVKYLGPFS Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFS 61
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.706e-12 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFS 215 MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SSGSPWYGPDRV YLGP S Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLS 62
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.548e-11 Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 33 MATSTMALSS-SFVGKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFS 215 MA S+MALSS + GK V + PS EL G R +MRK T K SSGSPWYGPDRVKYLGPFS Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFS 65
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.328e-11 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 36 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFS 215 ++S+MALSS + GK + L PS EL R +MRK T K SSGSPWYGPDRVKYLGPFS Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFS 66
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.328e-11 Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 3 Query: 120 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFS 215 GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFS Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFS 42
BLAST of CF417583 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.347e-11 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 33 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFS 215 MA+STMALSS+ F GKAVN+ S R++MRKT +K+ +SGSPWYGPDRV YLGP S Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLS 62 The following BLAST results are available for this feature:
BLAST of CF417583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417583 ID=CF417583; Name=CF417583; organism=Citrus sinensis; type=EST; length=217bpback to top |