CF417590

Overview
NameCF417590
Unique NameCF417590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 1
Query:  529 FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVA 717
            F  DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMI++GRLS  YKGIG+CFKRT  +EG+++
Sbjct:   27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVIS 89          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21
Identity = 52/70 (74.29%), Postives = 57/70 (81.43%), Query Frame = 1
Query:  511 EKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            +K  + FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK G L   Y GI +CFKRT  DEG+ +F
Sbjct:    4 DKKQSNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGSLDRRYTGIVECFKRTAADEGVASF 73          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 1
Query:  502 APAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            APA K  + F IDFLMGGVSAAV+KTAA+PIERVKLLIQNQDEM+K G L   Y GI DCFKRT   EG+++F
Sbjct:   14 APAPKKESNFLIDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISF 86          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21
Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 1
Query:  529 FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            F +DFL GG+SAAVSKTAAAPIERVKLLIQNQDEMIK GRL+ PYKGIG+CF RT+++EG
Sbjct:    8 FMVDFLAGGLSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLASPYKGIGECFVRTVREEG 67          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 1
Query:  517 GFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVA 717
            G   F  DFLMGGVSAAVSKTAAAPIER+KLL+QNQDEMI++GRL   Y GI DCFKRT  DEG++A
Sbjct:    9 GMPPFVADFLMGGVSAAVSKTAAAPIERIKLLVQNQDEMIRAGRLDRRYNGIIDCFKRTTADEGVMA 75          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 48/75 (64.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query:  496 VQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            + + A++    FAI+FLMGGVSAA++KTAA+PIERVK+LIQNQDEMIK G L + Y GI DCFKRT K EG+++F
Sbjct:    1 MSSDAKQQETNFAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISF 75          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = -3
Query:  108 KFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 242
            KFPENFTGCQDLAKQKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW
Sbjct:  127 KFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 1
Query:  529 FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            F +DFLMGGVSAA++KT AAPIERVKLL+QNQ+EM+K G L   YKGI DCFKRT   EGIV+F
Sbjct:   13 FGVDFLMGGVSAAIAKTGAAPIERVKLLMQNQEEMLKQGSLDTRYKGILDCFKRTATHEGIVSF 76          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.987e-19
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = -3
Query:  108 KFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 242
            KFP NFTGCQDLAKQKKVPFI+DDLE+EC+GK+K+KCGSNVFWKW
Sbjct:  101 KFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = -3
Query:  108 KFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 242
            +FP NFTGCQDLAKQKKVPFISDDLE+EC+GK+K+KCGSNVFWKW
Sbjct:   68 QFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112          
The following BLAST results are available for this feature:
BLAST of CF417590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ADT_SCHPO1.130e-2177.78ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_KLULA1.475e-2174.29ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT2_YEAST1.475e-2169.86ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT_CHLRE3.287e-2180.00ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT_NEUCR5.607e-2173.13ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT3_YEAST7.322e-2164.00ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
PSAN_ARATH4.709e-2091.11Photosystem I reaction center subunit N, chloropla... [more]
ADT1_YEAST2.356e-1971.88ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
PSAN_HORVU3.987e-1986.67Photosystem I reaction center subunit N, chloropla... [more]
PSAN_MAIZE5.207e-1986.67Photosystem I reaction center subunit N, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-520 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417590 ID=CF417590; Name=CF417590; organism=Citrus sinensis; type=EST; length=727bp
GAGTTTTTTTTTTTTTTTTTTAAGCACAAGTAAAGGTTCTTCAATGGAAA
CTTAGATACATGGGAGGGTAAAATAAAATGTTTAAAGAGATCAGTTGTCC
CACTTCACCATTTCCAGAAAACATTGGAACCACACTTGTATTTATCTTTC
CCTTTGCACTCCAATTCCAAATCATCCGAGATGAATGGCACTTTCTTTTG
CTTGGCAAGATCTTGGCAGCCTGTGAAGTTCTCAGGGAACTTGCCACCAA
TCTGTCATTTTTAAGGAAAAGTCACAATGATTGATCAGGTTCAACATCCT
TCCGTCATGCAGAAGGTAGCTGGACAGCTCCTTCATTCCAGCCTTTCCCA
AAATATTCAGGATTATGAAAGGCCAACCATGTACCAAAGACGTGGTGCTT
ATGGGAACTACTCCAATGCTGCATTCCAATACCCCATAGTCAGTGCAGCT
ACTACCGATCTATCTATGGTGCCGTCAACTGCATCTGCTATTTGCGTCCA
AGCCCCAGCTGAGAAAGGCTTTGCAGGCTTTGCTATCGATTTCCTTATGG
GTGGAGTTTCTGCTGCTGTGTCCAAAACAGCTGCTGCTCCCATTGAGCGT
GTTAAGCTTTTGATTCAAAACCAAGATGAGATGATCAAGAGTGGTAGGCT
ATCTGAACCCTACAAGGGCATTGGTGATTGTTTTAAGCGTACAATGAAGG
ATGAGGGTATTGTTGCTTTTGTGGAGA
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