CF417590

Overview
NameCF417590
Unique NameCF417590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 1 
Query:  526 GFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            GFA DFL GG+SAAVSKTA APIERVKLL+Q Q    K   + + YKGI DCF R  K++GI AF
Sbjct:    9 GFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-AASKQIAVDKQYKGIVDCFVRIPKEQGIGAF 72
[Close]
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  412 SNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKSGRLSEPYKGIGDCFKRTMKDEGIVAF 720
            S+A +Q   +S      +M P T   I      +     F  D L GG + A+SKTA APIERVKLL+Q QD   MIKSG++   Y GI +CF R   ++G+ +F
Sbjct:    3 SSALYQQAGLSGLLRASAMGPQTPF-IASPKETQADPMAFVKDLLAGGTAGAISKTAVAPIERVKLLLQTQDSNPMIKSGQVPR-YTGIVNCFVRVSSEQGVASF 105
The following BLAST results are available for this feature:
BLAST of CF417590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ADT1_ANOGA1.252e-1263.08ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT_CHLKE8.972e-1140.95ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-520 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417590 ID=CF417590; Name=CF417590; organism=Citrus sinensis; type=EST; length=727bp
GAGTTTTTTTTTTTTTTTTTTAAGCACAAGTAAAGGTTCTTCAATGGAAA
CTTAGATACATGGGAGGGTAAAATAAAATGTTTAAAGAGATCAGTTGTCC
CACTTCACCATTTCCAGAAAACATTGGAACCACACTTGTATTTATCTTTC
CCTTTGCACTCCAATTCCAAATCATCCGAGATGAATGGCACTTTCTTTTG
CTTGGCAAGATCTTGGCAGCCTGTGAAGTTCTCAGGGAACTTGCCACCAA
TCTGTCATTTTTAAGGAAAAGTCACAATGATTGATCAGGTTCAACATCCT
TCCGTCATGCAGAAGGTAGCTGGACAGCTCCTTCATTCCAGCCTTTCCCA
AAATATTCAGGATTATGAAAGGCCAACCATGTACCAAAGACGTGGTGCTT
ATGGGAACTACTCCAATGCTGCATTCCAATACCCCATAGTCAGTGCAGCT
ACTACCGATCTATCTATGGTGCCGTCAACTGCATCTGCTATTTGCGTCCA
AGCCCCAGCTGAGAAAGGCTTTGCAGGCTTTGCTATCGATTTCCTTATGG
GTGGAGTTTCTGCTGCTGTGTCCAAAACAGCTGCTGCTCCCATTGAGCGT
GTTAAGCTTTTGATTCAAAACCAAGATGAGATGATCAAGAGTGGTAGGCT
ATCTGAACCCTACAAGGGCATTGGTGATTGTTTTAAGCGTACAATGAAGG
ATGAGGGTATTGTTGCTTTTGTGGAGA
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