CF417592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.111e-42 Identity = 82/142 (57.75%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++SG++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.895e-42 Identity = 82/142 (57.75%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+ KK EDI PS+HN DVP+V R D QLI IS+D F++L+TE+G+ ++DL++P E L Q++ F+SGKDL+ +V A GEE + A+K Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 2.475e-42 Identity = 82/144 (56.94%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 15 ADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKD 446 ADAG+S T+P Q +RKNG++VIK RPCK+V++STSKTGKHGHAK H V IDIF GKKLED+ PS+HN +VP V R +YQL+DI +DGF+SL+ +G+TKDD++ P E L ++ F+ GKDL+V++ AMGEE + K+ Sbjct: 11 ADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42 Identity = 81/142 (57.04%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42 Identity = 81/142 (57.04%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42 Identity = 81/142 (57.04%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 4.221e-42 Identity = 81/142 (57.04%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40 Identity = 79/142 (55.63%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 DAGAS TFP Q +RKNG++V+KG PCK+VE+S SKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G +DLRLP + +L +I+ ++ G++++++V AM EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.501e-39 Identity = 83/147 (56.46%), Postives = 102/147 (69.39%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 458 DAGAS T+P Q +RK G++VIK RPCK+V++STSKTGKHGHAK H V IDIF GKKLED+ PS+HN DVP+V RTDYQ I ED F+ L+ NG K D+++P E L +I+ E GKD V VQ AMGEE +K+ K Sbjct: 18 DAGASATYPMQCSALRKGGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 1.961e-39 Identity = 76/126 (60.32%), Postives = 100/126 (79.37%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLV 395 DAGAS TFP Q +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DGF+SLL ++G ++DLRLP E L +I+ ++ G++++ Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYDCGEEII 134 The following BLAST results are available for this feature:
BLAST of CF417592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417592 ID=CF417592; Name=CF417592; organism=Citrus sinensis; type=EST; length=618bpback to top |