CF417592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.029e-36 Identity = 74/145 (51.03%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 9 SKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 ++A +GAS TFP Q +RKNG++VIKG PCK+V++STSKTGKHGHAK + IDIF GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + +I + GK+ +VSV A+G+E + ++K Sbjct: 13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.718e-35 Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQI 431 D+GA+ TFP+Q +RKN +++IKGRPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L QI+D +E + ++V V A+GEE I Sbjct: 15 DSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAI 152
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.231e-33 Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 15 ADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQINALK 443 A++GA+ TFP+Q +RKN +++I+GRPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + +L + I++ E + ++V V A GEE I K Sbjct: 14 AESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMP-EGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 36 TFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQI 431 T P++AG I+ +IVI G PCKVVEV SKTGKHG AK VGI F+G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + S++ +G E V V MG +I Sbjct: 3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEGVE------VEVWEVMGRHKI 127
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 18 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVG 167 D GASKT P+Q +RK G++V+K RPCK+VE+STSKTGKHG AK H VG Sbjct: 3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 G ++ Y+VI G PC+VVE+S +KTGKHG AK + V I +F G+K + P +VP + + Q++ D + EN T D+ PTD +++ +I+ G E Sbjct: 9 GDLKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPGAE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 30 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 SKT+ G ++ +I+I G PCK+VE+S +KTGKHG AK H V I + +G K + P +VP + + Q++ I+ D V L+ ++ LP +E L S+++ G E Sbjct: 2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPGVE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 443 G +++ YIVI G PC+VVEV+ +KTGKHG AK + + + IF G K + P +VP + + Q+I D + E T ++ +PT+E++ S+IK KD V MG ++I +K Sbjct: 9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.565e-12 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 G ++ Y++I G PC+VVE++ +KTGKHG AK + V I +F G+K + P +VP + + Q++ D + E+ T DL PT+ ++S+I+ G E Sbjct: 9 GDLKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPGAE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12 Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 30 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 SKT+ G ++ +I+I G PC++VE+S +KTGKHG AK H V I +F G K + P +VP + + Q+I D + E T ++ P+DE L ++K G E Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPGVE 115 The following BLAST results are available for this feature:
BLAST of CF417592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417592 ID=CF417592; Name=CF417592; organism=Citrus sinensis; type=EST; length=618bpback to top |