CF417592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SULIK (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 G ++ Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SULIA (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 G ++ Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K + P +VP + + Q+I D + E T ++ PT++ L S+I+ E Sbjct: 9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_SULSO (Translation initiation factor 5A OS=Sulfolobus solfataricus GN=eif5a PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 377 G ++ Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K + P +VP + + Q+I + + E+ T ++ PT++ L S+IK E Sbjct: 9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGNKIQVMDLESYET-FEIEKPTEDELASKIKPNAE 115
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_METJA (Translation initiation factor 5A OS=Methanocaldococcus jannaschii GN=eif5a PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 54 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDL 392 G+++ Y++I G PC++V++S SK GKHG AK VGI IF K E + P+S +VP + R Q++ I D V ++ + T + L LP E + +G E G ++ Sbjct: 10 GSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDRRKGQVLAIMGD-MVQIM--DLQTYETLELPIPEGI-----EGLEPGGEV 114
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_PYRCJ (Translation initiation factor 5A OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 48 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISED 278 + G +++ Y+VI G PC+VVE+ SKTGKHG AK V + +F+G K +P +VP + + Q++ IS D Sbjct: 7 EVGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARVVAVGVFDGAKRTLSLPVDAQIEVPIIEKFTAQVLSISGD 83
BLAST of CF417592 vs. ExPASy Swiss-Prot
Match: IF5A_PYRAR (Translation initiation factor 5A OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 48 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISED 278 + G +++ Y+VI G PC+VVE+ SKTGKHG AK V + +F+G K +P +VP + + Q++ IS D Sbjct: 7 EVGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGMFDGGKRTLSLPVDAQIEVPIIEKFTAQILSISGD 83 The following BLAST results are available for this feature:
BLAST of CF417592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417592 ID=CF417592; Name=CF417592; organism=Citrus sinensis; type=EST; length=618bpback to top |