CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.836e-15
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG L DGT++AVK+   GS QG +EFL EI  +S LHH NLV L G C E G+ +LVYEF+ N
Sbjct:  636 GPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVEN 702          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.010e-15
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 GKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG +  G T+VAVKR +  S QG KEF TE++ LS+L H +LVSL+GYCDE+ E +LVYE+M +G
Sbjct:  530 GSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHG 598          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.010e-15
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG L +G  VAVKR  +GS QG+ EF  E+  L+RL HRNLV L+G+C+E  EQ+LVYEF+ N
Sbjct:  365 GTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPN 431          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.543e-15
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 1
Query:    7 VYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            VYKG+L DGT VAVKRA   S   +   EF TE+  LSRL+H +L+SL+GYC+E GE++LVYEFM++G
Sbjct:  526 VYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHG 593          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.546e-15
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG  P G  VAVKR  + S QGEKEF  E+  +++L HRNLV L+GYC E  E++LVYEF+ N
Sbjct:  356 GEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPN 422          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.116e-14
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKGI P G  VAVKR  + S QGE+EF  E+  +++L HRNLV L+G+C E  E++LVYEF+ N
Sbjct:  363 GEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPN 429          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.116e-14
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG+LP+ T +AVKR    S QG +EF  E+  +++L H+NLV L+G+C E  EQ+LVYEF+SN
Sbjct:  351 GEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSN 417          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.458e-14
Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 GKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG +  G T+VAVKR +  S QG KEF TE++ LS+L H +LVSL+GYCD++ E +LVYE+M +G
Sbjct:  537 GSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHG 605          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.904e-14
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G L D   VAVK     S QG KEF  E++ L R+HH NLVSLVGYCDE+    L+YE+M+NG
Sbjct:  585 GVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANG 652          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.486e-14
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 1
Query:    1 GKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVY+G +  GT  VA+KR    S QG  EF TEI+ LS+L HR+LVSL+GYC+E  E +LVY++M++G
Sbjct:  548 GKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHG 616          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
Y1534_ARATH3.836e-1558.21Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH5.010e-1557.97Putative receptor-like protein kinase At5g39000 OS... [more]
CRK39_ARATH5.010e-1558.21Putative cysteine-rich receptor-like protein kinas... [more]
ACR4_ARATH6.543e-1558.82Serine/threonine-protein kinase-like protein ACR4 ... [more]
CRK20_ARATH8.546e-1556.72Putative cysteine-rich receptor-like protein kinas... [more]
CRK4_ARATH1.116e-1455.22Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK31_ARATH1.116e-1453.73Putative cysteine-rich receptor-like protein kinas... [more]
Y5389_ARATH1.458e-1456.52Probable receptor-like protein kinase At5g38990 OS... [more]
Y5169_ARATH1.904e-1455.88Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH2.486e-1455.07Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
back to top