CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.241e-14
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG+LP+ T VAVKR    S QG +EF  E+  +++L H+NLV L+G+C E  EQ+LVYEF+ N
Sbjct:  333 GEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPN 399          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.241e-14
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG  P G  VAVKR  + S QGE+EF  E+  +++L HRNLV L+GYC E  E++LVYEF+ N
Sbjct:  520 GEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHN 586          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.241e-14
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    7 VYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            V+KGIL DGTVVAVKRA + S   +  KEF  E+  LSRL+H +L++L+GYC++  E++LVYEFM++G
Sbjct:  519 VFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHG 586          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G + DG  VAVK   + S    ++F+TE+  LSR+HHRNLV L+GYC+E   ++LVYE+M NG
Sbjct:  618 GSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNG 685          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+ P G  +AVKR    S QG+ EF  EI  L++L HRNLV L+G+C +  E++LVYEF+ N
Sbjct:  369 GSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKN 435          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG L  G  VAVKR  + S QGEKEF  E+  +++L HRNLV L+GYC E  E++LVYEF+ N
Sbjct:  338 GEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPN 404          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG L +GT VAVKR  + S QG +EF  E+  +++L HRNLV L+GYC E  E++LVYEF+ N
Sbjct:  379 GEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPN 445          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.234e-14
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY GIL     +AVK   + S+QG KEF  E++ L R+HH NLVSLVGYCDEE    L+YE+  NG
Sbjct:  585 GVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNG 652          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.234e-14
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC----DEEGEQMLVYEFMSNG 204
            G VYKG+LPDG+V+AVK+  E   QG+ EF  E++ +S L HRNLV L G      D E ++ LVY++MSNG
Sbjct:  307 GFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNG 378          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.234e-14
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 GKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G+VYKG L   G VVAVK+     LQG +EFL E+  LS LHH NLV+L+GYC +  +++LVYEFM  G
Sbjct:   98 GRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLG 166          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
CRK32_ARATH4.241e-1453.73Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH4.241e-1455.22Putative cysteine-rich receptor-like protein kinas... [more]
CRI4_MAIZE4.241e-1455.88Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y1677_ARATH5.539e-1451.47Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH5.539e-1452.24Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK19_ARATH5.539e-1456.72Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK12_ARATH5.539e-1455.22Putative cysteine-rich receptor-like protein kinas... [more]
Y2289_ARATH7.234e-1454.41Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH7.234e-1451.39Probable receptor-like protein kinase At1g11050 OS... [more]
PBS1_ARATH7.234e-1455.07Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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