CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.234e-14
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY+G L DG  VAVK     S QG +EF  E+  LS + H NLV L+GYC+E  +Q+LVY FMSNG
Sbjct:  608 GSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNG 675          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.448e-14
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G L D T VAVK     S QG KEF  E++ L R+HHRNLV LVGYCD+     L+YE+M+NG
Sbjct:  578 GTVYHGNLED-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANG 644          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.448e-14
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY+GIL DGT VAVK       Q EKEF  E++ + R+ H+NLV L+GYC E   +MLVY+F+ NG
Sbjct:  166 GIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNG 233          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.448e-14
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY+G L DG  VAVK     S QG +EF  E+  LS + H NLV L+GYC+E  +Q+LVY FMSNG
Sbjct:  607 GSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNG 674          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.448e-14
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG  P+GT VAVKR  + S QGE+EF  E+  +++L HRNLV L+GY  +  E++LVYEF+ N
Sbjct:  324 GEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPN 390          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.448e-14
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG L DGT VAVKR  + S QGE EF  E+  +++L HRNLV L+G+C +  E++LVYE++ N
Sbjct:  349 GEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPN 415          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.234e-13
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G + D   VAVK   E S QG K+F  E+  L R+HH NLV+LVGYCDE    +L+YE+MSNG
Sbjct:  603 GVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNG 670          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.612e-13
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G L     VAVK   + S QG KEF  E++ L R+HH NLV+LVGYCDE+    L+YE+MSNG
Sbjct:  578 GVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNG 645          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.105e-13
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G L DG  VAVK     S QG KEF  E++ L R+HHR+LV LVGYCD+     L+YE+M+NG
Sbjct:  596 GTVYHGNL-DGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANG 662          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.105e-13
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK IL DG+ VA+K+    S QG++EF+ E++ + ++ HRNLV L+GYC    E++LVYEFM  G
Sbjct:  895 GDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYG 962          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
NORK_MEDTR7.234e-1454.41Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5188_ARATH9.448e-1455.88Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH9.448e-1452.94Probable serine/threonine-protein kinase At1g01540... [more]
NORK_PEA9.448e-1454.41Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK24_ARATH9.448e-1453.73Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK10_ARATH9.448e-1453.73Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y4245_ARATH1.234e-1354.41Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH1.612e-1354.41Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH2.105e-1354.41Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_ARATH2.105e-1350.00Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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