CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+L DG  +AVK+    S QG +EF+TEI  +S L H NLV L G C E  E +LVYE++ N
Sbjct:  679 GPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLEN 745          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+L DG  +AVK+    S QG +EF+TEI  +S L H NLV L G C E  E +LVYE++ N
Sbjct:  681 GPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLEN 747          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKGILPD ++VA+K+A+ G     ++F+ E+  LS+++HRN+V L+G C E    +LVYEF+S+G
Sbjct:  422 GTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSG 489          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+ P+GT VA KR  + S QGE EF  E+  ++RL H+NLV L+G+  E  E++LVYEF+ N
Sbjct:  375 GAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPN 441          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+V+KG  P+GT VAVKR  + S QGE+EF  E+  +++L HRNLV L+G+  E  E++LVYE+M N
Sbjct:  347 GEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPN 413          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13
Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVYKG L DGT+VAVKR +E   QG E +F TE++ +S   HRNL+ L G+C    E++LVY +M+NG
Sbjct:  301 GKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 369          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G +     VAVK     S QG KEF TE++ L R++H NLVSLVGYCDE+    L+Y++M NG
Sbjct:  582 GMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNG 649          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG LPDG  +AVKR    S QG  EF TE+  +++L H+NLV L G+  +E E++LVYEF+ N
Sbjct:  345 GVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPN 411          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 195
            G VYKG+L DG  +AVKR  + + QGE EF  E   +++L HRNLV L+GY  E  E++LVYEF+
Sbjct:  356 GAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFL 420          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+V+ G+L +GT VA+KR  + S QG +EF  E+  +++LHHRNLV L+G+C E  E++LVYEF+ N
Sbjct:  349 GEVFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPN 414          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
Y5344_ARATH7.998e-1352.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH7.998e-1352.24Probable LRR receptor-like serine/threonine-protei... [more]
WAK4_ARATH7.998e-1348.53Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CRK21_ARATH7.998e-1352.24Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK16_ARATH7.998e-1352.24Putative cysteine-rich receptor-like protein kinas... [more]
BAK1_ARATH7.998e-1353.62BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y1756_ARATH1.045e-1251.47Probable LRR receptor-like serine/threonine-protei... [more]
CRK27_ARATH1.045e-1252.24Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK26_ARATH1.045e-1252.31Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK14_ARATH1.045e-1250.75Cysteine-rich receptor-like protein kinase 14 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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