CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G +     VAVK     S QG K+F  E++ L R+HH+NLV LVGYCDE     L+YE+M+NG
Sbjct:  590 GMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANG 657          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY+G   DGTVVAVKR ++     G  +F TE++ +S   HRNL+ L+GYC    E++LVY +MSNG
Sbjct:  311 GNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNG 379          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G V+KG+L DG VVAVK+    S QG +EFL EI  +S L H NLV L G+C E  + +L YE+M N
Sbjct:  693 GAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMEN 759          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G+V+K  L DG+ VA+K+    S QG++EF+ E++ L ++ HRNLV L+GYC    E++LVYEFM  G
Sbjct:  850 GEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYG 917          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK   PDG+  AVKR      Q E+EF  E++ LSR  H+NLVSL GYC    +++L+Y FM NG
Sbjct:  766 GLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENG 833          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+   G  +AVKR    S QG+ EF  EI  L++L HRNLV L+G+C E  E++LVYEF+ N
Sbjct:  373 GSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKN 439          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 36/68 (52.94%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G L D T VAVK     S QG KEF  E++ L R+HHR+LV LVGYCD+     L+YE+M  G
Sbjct:  582 GTVYHGNLDD-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKG 648          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKGILPD T+VA+K+A+    +   +F+ E+  LS+++HRN+V ++G C E    +LVYEF++NG
Sbjct:  427 GTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNG 494          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKGILPD ++VA+K+A+ G+    ++F+ E+  LS+++HRN+V ++G C E    +LVYEF+++G
Sbjct:  416 GTVYKGILPDNSIVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSG 483          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG L DGT +AVKR + G + G+   EF +EI  L+++ HR+LV+L+GYC +  E++LVYE+M  G
Sbjct:  600 GVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQG 669          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
Y5182_ARATH1.364e-1250.00Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.364e-1249.28Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH1.364e-1252.24Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH1.364e-1248.53Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
PSKR2_ARATH1.782e-1250.00Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
CRK28_ARATH1.782e-1252.24Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5189_ARATH2.327e-1252.94Probable LRR receptor-like protein kinase At1g5189... [more]
WAK3_ARATH2.327e-1247.06Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAK2_ARATH2.327e-1245.59Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
TMK1_ARATH2.327e-1250.00Probable receptor protein kinase TMK1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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