CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG+L  G  +AVKR    S QG+ EF+ E+  +++L HRNLV L+G+C +  E++L+YEF  N
Sbjct:  356 GAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKN 422          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK  L DG+VVA+K+  + + QG++EF+ E++ + ++ HRNLV L+GYC    E++LVYE+M  G
Sbjct:  870 GDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYG 937          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG L DG VVAVK    GS QG+ +F+ EI  +S + HRNLV L G C E   +MLVYE++ NG
Sbjct:  706 GPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNG 773          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG L DG  +AVKR  + S+QG  EF+ E+  ++RL H NLV ++G C E  E+ML+YE++ N
Sbjct:  540 GIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLEN 606          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G +     VAVK   + S QG KEF  E+  L R+HH NLVSLVGYC E     LVYEF+ NG
Sbjct:  576 GMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNG 643          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG   +GT VAVKR  + S QG+ EF  E+  +++L HRNLV L+G+    GE++LVYE+M N
Sbjct:  349 GEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPN 415          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK  L DG+VVA+K+    S QG++EF  E++ + ++ HRNLV L+GYC    E++LVYE+M  G
Sbjct:  900 GDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYG 967          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK  L DG+VVA+K+    S QG++EF  E++ + ++ HRNLV L+GYC    E++LVYE+M  G
Sbjct:  900 GDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYG 967          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.970e-12
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVYKG L DGT+VAVKR +E    G E +F TE++ +S   HRNL+ L G+C    E++LVY +M+NG
Sbjct:  317 GKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 385          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.970e-12
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVYKG L DGT+VAVKR +E    G E +F TE++ +S   HRNL+ L G+C    E++LVY +M+NG
Sbjct:  314 GKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 382          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
CRK41_ARATH2.327e-1247.76Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
BRL3_ARATH2.327e-1247.06Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y1561_ARATH3.039e-1254.41Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE3.039e-1249.25Putative serine/threonine-protein kinase receptor ... [more]
RLK7_ARATH3.039e-1252.94Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK15_ARATH3.039e-1250.75Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BRI1_SOLPE3.039e-1248.53Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC3.039e-1248.53Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
SERK2_ARATH3.970e-1252.17Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH3.970e-1252.17Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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