CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.970e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG   +G  VAVKR  + S QGE EF TE+  +++L HRNLV L+G+  +  E++LVYE+M N
Sbjct:  365 GEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPN 431          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.970e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG   +G  VAVKR  + S QGE EF TE+  +++L HRNLV L+G+  +  E++LVYE+M N
Sbjct:  363 GEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPN 429          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G +     VAVK     S QG K+F  E++ L R+HH+NLV LVGYC+E  +  L+YE+M+NG
Sbjct:  589 GIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANG 656          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKGIL D ++VA+K+A+ G     ++F+ E+  LS+++HRN+V L+G C E    +LVYEF+S+G
Sbjct:  420 GTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSG 487          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G+VYK  L DG+VVA+K+    + QG++EF+ E++ + ++ HRNLV L+GYC    E++LVYE+M  G
Sbjct:  871 GEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWG 938          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12
Identity = 36/68 (52.94%), Postives = 43/68 (63.24%), Query Frame = 1
Query:   16 GILPDGTV-----VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G++  GTV     VAVK   + S QG KEF  E+  L R+HH NLVSLVGYCDE     L+YEF+ NG
Sbjct:  592 GVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNG 659          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1
Query:    1 GKVYKG-ILPDGT------VVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLVYEFMSN 201
            G VYKG IL +G       VVA+K+     LQG K++L E+QFL  ++H N+V L+GYC E+G    E++LVYE+MSN
Sbjct:   98 GIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSN 175          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G +     VAVK   + S QG K F  E++ L R+HH NLVSLVGYCDE     L+YE+M NG
Sbjct:  589 GVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNG 656          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G+VY+   P+G ++A+K+      SLQ E  FL  +  +SRL H N+V L GYC E G+++LVYE++ NG
Sbjct:  407 GRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNG 476          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVYKG L DG +VAVKR +E   +G E +F TE++ +S   HRNL+ L G+C    E++LVY +M+NG
Sbjct:  306 GKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 374          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
CRK8_ARATH3.970e-1250.75Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH3.970e-1250.75Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y5181_ARATH5.184e-1248.53Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH5.184e-1247.06Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
BRL1_ARATH5.184e-1247.06Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5596_ARATH6.771e-1252.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5707_ARATH8.843e-1248.72Probable receptor-like protein kinase At5g47070 OS... [more]
Y2899_ARATH8.843e-1251.47Probable leucine-rich repeat receptor-like protein... [more]
SRF8_ARATH8.843e-1244.29Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SERK4_ARATH8.843e-1250.72Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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