CF417599

Overview
NameCF417599
Unique NameCF417599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL14_ORYSJ (Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.178e-49
Identity = 99/211 (46.92%), Postives = 136/211 (64.45%), Query Frame = 1
Query:   58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSK--LPI-DNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            +++    GL  Y+VFI+I+LILGDGLYN +K++  T     +     SK  LP+ DN +  + +  +  D ++R  +FLKD IP   A  GYV +AA+S  T+P IF                   FCN+YG+GLTD SL+ TY K+ +F+  +  G ++GGV+ GLAACGVMMSIVSTA+DLMQDFKTGYLTL+S +SMF+SQ++GT  G
Sbjct:  346 ISDNSLHGLQAYRVFISIALILGDGLYNFLKVLIRTIAGFISMVQNNSKGMLPVSDNGMSMSTAEEVSFDDERRTEIFLKDQIPKSVAYGGYVVVAALSIGTLPEIFPQLKWYYILVAYIVAPVLAFCNAYGSGLTDWSLASTYGKLAIFVFGAWAGLSHGGVLVGLAACGVMMSIVSTASDLMQDFKTGYLTLASPRSMFISQVIGTGMG 556          

HSP 2 Score: 30.0314 bits (66), Expect = 6.178e-49
Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP I++  G WYP D+
Sbjct:  328 GVMWPLIAKKKGSWYPADI 346          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL11_ORYSJ (Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.948e-48
Identity = 100/212 (47.17%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKE--LCNKRTKVSKLPI-DNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            TL      GL  YKVFI I++ILGDGLYN +K+   T K   +  K    + LPI DN      +     D K+R  +FLKD IP   A  GYV LA I++  +P I                    FCN+YG+GLTD SL+ TY K+ +F+  +  G ++GGV+ GLAACGVMM+IV TA+DLMQDFKTGY+TL+S +SMFVSQ++GTA G
Sbjct:  331 TLPESSLLGLQAYKVFITIAVILGDGLYNFVKVFGYTIKGFIVMYKNKNSNTLPISDNGTPANATEEESFDDKRRNELFLKDQIPKTVAIGGYVVLAVITSGCLPLIIPQLKWYYILIAYIFAPIMAFCNAYGSGLTDWSLATTYGKLAIFVFGAWAGASHGGVLVGLAACGVMMNIVGTASDLMQDFKTGYMTLASPRSMFVSQVIGTAMG 542          

HSP 2 Score: 29.6462 bits (65), Expect = 3.948e-48
Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP IS+  G WYP  L
Sbjct:  314 GIMWPLISKKKGSWYPETL 332          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL8_ORYSJ (Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.949e-48
Identity = 106/212 (50.00%), Postives = 132/212 (62.26%), Query Frame = 1
Query:   58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTK-VSKLPIDNEIQD---TESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            L      GL GY+VFI+I++I+GDGL+N   I+  T  +L  KR    SK P +        TE   L  D ++R  VFLKD IPT  AA+ YV LAAIS   IP IF                   FCN+YG GLTD SLS +Y K+ +FI  + +G  +GGV+AGLAACG+MM IVSTA+DL+QDFKTGYLTL+S +SMFVSQ+LGT  G
Sbjct:  306 LPKSSLHGLNGYQVFISIAMIVGDGLFNFFSIVLRTAYDLYLKRRGGASKQPQETPFAGATGTERQVLSFDDRRRTQVFLKDQIPTTIAAAAYVLLAAISVVAIPHIFRQLRPKHVVWAYVVAPLFAFCNAYGTGLTDWSLSSSYGKLAIFIFGANIGAKDGGVVAGLAACGLMMGIVSTASDLVQDFKTGYLTLTSPRSMFVSQVLGTGMG 517          

HSP 2 Score: 27.7202 bits (60), Expect = 3.949e-48
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WPYI    G WY   L
Sbjct:  288 GIMWPYIESKKGSWYDAGL 306          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL1_ARATH (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 3.288e-47
Identity = 93/207 (44.93%), Postives = 130/207 (62.80%), Query Frame = 1
Query:   58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            L   + K +YGYKVF++++LILGDGLY  +KI+ VT   + N   ++   P  N++ D    +   D K+ EN FL+D IP WFA SGY+  AA+ST  +P IF                   FCN+YGAGLTD +++  Y KIGLF+IA++ G   GV+AGLA CG++ S+VS +  LMQDFKT + T++S K+MF SQ++GT  G
Sbjct:  315 LDEHNMKSIYGYKVFLSVALILGDGLYTFVKILFVT---IANVNARLKNKP--NDLDDVGHKKQRKDLKEDEN-FLRDKIPMWFAVSGYLTFAAVSTVVVPLIFPQLKWYYVIVAYIFAPSLAFCNAYGAGLTDINMAYNYGKIGLFVIAAVTGRENGVVAGLAGCGLIKSVVSVSCILMQDFKTAHYTMTSPKAMFASQMIGTVVG 515          

HSP 2 Score: 25.7942 bits (55), Expect = 3.288e-47
Identity = 7/19 (36.84%), Postives = 12/19 (63.16%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP + +  G W+P +L
Sbjct:  297 GLMWPLLDKLKGSWFPDNL 315          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL9_ORYSJ (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.341e-45
Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 1
Query:   76 KGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            K L GYK FI ++LILGDGLYN +KI+++T K L +     SKL    + +D      ++D+  R  VF  D IP+W A SGY+GL  I+   IP +F                   FCN+YGAGLTD +++  Y KI LFI+A+  G + GV+AGL  CG++ S+VS +ADLM DFKTG+LTL+S +SM ++Q +GT  G
Sbjct:  333 KSLQGYKAFICVALILGDGLYNFVKIVALTIKNLFDS----SKLKNAKKGEDMP----VLDELHRNEVFTTDNIPSWLAFSGYLGLTFIAVIAIPMMFHEMKWYYVVIAYLLAPALGFCNAYGAGLTDINMAYNYGKIALFILAAWAGKDSGVVAGLVGCGLVKSLVSISADLMHDFKTGHLTLTSPRSMIIAQAIGTVMG 525          

HSP 2 Score: 29.261 bits (64), Expect = 1.341e-45
Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP IS   GDWY  D+
Sbjct:  309 GVMWPLISDLKGDWYSADI 327          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL2_ARATH (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.748e-45
Identity = 93/209 (44.50%), Postives = 129/209 (61.72%), Query Frame = 1
Query:   55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKREN-VFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            TL +   +GL GYKVFI I+LILGDGLYN +KI+  T +   ++ +K +   I   ++  E S    D  KREN VF+++ IP W A  GY+  + +S   IP +F                   FCN+YGAGLTD +++  Y K  LF++A+L G N GV+AG+ ACG++ SIVS +ADLM DFKTG+LT +S +SM V+Q +GTA G
Sbjct:  299 TLKDNSMQGLNGYKVFICIALILGDGLYNFVKILFFTGRSFHSRLSKTNS--ISTLVEVPEDSTKESDNLKRENEVFVRESIPLWMACVGYLFFSLVSIIAIPLMFPQLKWYFVLVAYLLAPSLSFCNAYGAGLTDMNMAYNYGKAALFVMAALAGKNDGVVAGMVACGLIKSIVSVSADLMHDFKTGHLTQTSPRSMLVAQAIGTAIG 505          

HSP 2 Score: 26.9498 bits (58), Expect = 1.748e-45
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP I++  G+W+P  L
Sbjct:  282 GIMWPLIARLKGEWFPATL 300          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL3_ARATH (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.192e-44
Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 1
Query:   55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            TL     K L GYKVFI+ISLILGDGLY  IKI+   FK   N   K++    ++   ++E  +  I   KR+ +F++D IP W AA GY   + +S   IP +F                   F N+YGAGLTD +++  Y K+ LFI+A++ G   GV+AGL  CG++ SIVS ++DLM DFKTG+LTL+S +SM VSQ +GTA G
Sbjct:  311 TLPENSMKSLNGYKVFISISLILGDGLYQFIKIL---FKTGINMYVKLNNR--NSGKSNSEKDKQSIADLKRDEIFVRDSIPLWVAAVGYAAFSVVSIIAIPIMFPELKWYFIVVAYMLAPSLGFSNAYGAGLTDMNMAYNYGKVALFILAAMAGKQNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIG 513          

HSP 2 Score: 26.9498 bits (58), Expect = 4.192e-44
Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP I    GDW+P  L
Sbjct:  294 GIMWPLIKGLKGDWFPSTL 312          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL17_ORYSJ (Probable metal-nicotianamine transporter YSL17 OS=Oryza sativa subsp. japonica GN=YSL17 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.208e-43
Identity = 84/208 (40.38%), Postives = 124/208 (59.62%), Query Frame = 1
Query:   70 DFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKR----TKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGG-VIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            D  G+ GY+VF+ +S+IL DGL+ ++  +  T   +  +R    T  + +P    +  TE +    D ++R  VFL+D  PTW A + Y  LAA+S   +P ++                   FCN+YG G+TD +LS TY KI + + +S VG +GG V+AGLAACG+++S VS ++D MQDFKTGYLTL+S ++M V Q+ GTA G
Sbjct:  313 DLGGIMGYRVFVGVSMILADGLFTILSALVRTACAMRKRRRGASTVTAAVPPFQCLSATERTMQSFDDRRRAQVFLRDSFPTWVAVASYAALAALSVVAVPLLYPQLGHRHVAAAYVAAPVFAFCNAYGVGVTDMNLSATYGKIAMMVFSSWVGMDGGGVVAGLAACGIIVSAVSGSSDFMQDFKTGYLTLTSPRAMLVGQVAGTALG 520          

HSP 2 Score: 31.5722 bits (70), Expect = 1.208e-43
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G LWPYI   AG W+P +L
Sbjct:  291 GILWPYIETKAGRWFPENL 309          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL16_ORYSJ (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 5.919e-43
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:   79 GLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            GL+GYK FI I+L++GDG YN +K+I VT K +   R +  +  ++N + D ++  + ID  +R  VF +D IPTW A +GY  L+ I+   IP +F                   FCN+YG GLTD ++   Y KI LFI A+  G + GV+AGL  CG++  +V  +ADLM DFKTG+LTL+S +SM V Q++GT  G
Sbjct:  322 GLFGYKSFICIALLVGDGFYNFVKVIVVTLKSV---RERSRRRGLNNRVADADT--MAIDDMQRNEVFNRDNIPTWMAYTGYTLLSVIAVVLIPVMFRQVKWYYVIIAYLLAPALGFCNAYGTGLTDMNMGYNYGKIALFIFAAWAGKDDGVVAGLVGCGLVKQLVLISADLMHDFKTGHLTLTSPRSMLVGQVVGTLMG 516          

HSP 2 Score: 25.409 bits (54), Expect = 5.919e-43
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWY 47
            G +WP I +  G+WY
Sbjct:  297 GIMWPLIGKQKGNWY 311          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL1_ORYSJ (Probable metal-nicotianamine transporter YSL1 OS=Oryza sativa subsp. japonica GN=YSL1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.348e-42
Identity = 94/214 (43.93%), Postives = 124/214 (57.94%), Query Frame = 1
Query:   73 FKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDN-----------EIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            FKG+ GYKV + +S++LGD L+ L   I+V   +   K  +  KL +D            +  D        D+++R  VFL DGIP  FA +GYV LAA+STA +P IF                   FCNSY +GL D SL+  Y K+ +F++ + VG  +GGVIAGLAACGVMM ++  AA+LM DFKT YLTL+S  SMF SQ +GTA G
Sbjct:  302 FKGINGYKVPMGVSMVLGDCLFQL-GAITVKAVQHYRKGRQEQKLAVDGAADDGGGGCVPDDDDENKWHATYDERRRNQVFLSDGIPDQFAVAGYVALAALSTALVPRIFPQIRYHHVAVCYAVAPLLAFCNSYTSGLMDWSLATVYGKLAIFVVGASVGAASGGVIAGLAACGVMMVVIGDAAELMHDFKTAYLTLTSPVSMFASQAIGTALG 514          

HSP 2 Score: 25.7942 bits (55), Expect = 8.348e-42
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWY 47
            GF+WP +    G+WY
Sbjct:  280 GFIWPALQAKQGEWY 294          
The following BLAST results are available for this feature:
BLAST of CF417599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
YSL14_ORYSJ6.178e-4946.92Probable metal-nicotianamine transporter YSL14 OS=... [more]
YSL11_ORYSJ3.948e-4847.17Probable metal-nicotianamine transporter YSL11 OS=... [more]
YSL8_ORYSJ3.949e-4850.00Probable metal-nicotianamine transporter YSL8 OS=O... [more]
YSL1_ARATH3.288e-4744.93Metal-nicotianamine transporter YSL1 OS=Arabidopsi... [more]
YSL9_ORYSJ1.341e-4544.78Probable metal-nicotianamine transporter YSL9 OS=O... [more]
YSL2_ARATH1.748e-4544.50Metal-nicotianamine transporter YSL2 OS=Arabidopsi... [more]
YSL3_ARATH4.192e-4444.23Metal-nicotianamine transporter YSL3 OS=Arabidopsi... [more]
YSL17_ORYSJ1.208e-4340.38Probable metal-nicotianamine transporter YSL17 OS=... [more]
YSL16_ORYSJ5.919e-4342.50Probable metal-nicotianamine transporter YSL16 OS=... [more]
YSL1_ORYSJ8.348e-4243.93Probable metal-nicotianamine transporter YSL1 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-529 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417599 ID=CF417599; Name=CF417599; organism=Citrus sinensis; type=EST; length=684bp
GGGGTTTTCTCTGGCCCTATATCTCCCAACATGCTGGTGACTGGTATCCA
NCTGACCTTGGCTAATANTGATTTTAAAGGNCTTTATGGATATAAGGTCT
TCATAGCTATTTCCCTTATCCTTGGGGATGGTCTTTACAATCTGATAAAG
ATAATCTCTGTAACTTTCAAGGAATTGTGCAACAAAAGAACCAAAGTTAG
CAAACTTCCAATTGATAATGAGATTCAAGATACTGAGAGTTCCAGATTGC
TAATAGATCAGAAAAAACGAGAGAATGTATTTCTAAAAGATGGGATACCC
ACCTGGTTTGCTGCTTCTGGATATGTGGGCCTGGCAGCTATATCAACAGC
AACAATTCCCACCATCTTTCCACCTCTCAAGTGGTACTTAGTTCTCTTGT
TATACCTTATTGCCCCAGCCCTAGCCTTCTGCAACTCTTATGGGGCGGGA
CTTACAGACTGCAGCTTATCTTTAACCTATGCAAAAATTGGGCTTTTCAT
CATTGCTTCTTTGGTTGGAACCAATGGTGGGGTTATTGCTGGGTTAGCAG
CTTGTGGGGTTATGATGTCCATTGTCTCTACTGCAGCTGATCTCATGCAG
GATTTTAAGACAGGTTACCTCACTCTATCATCAGCCAAGTCTATGTTTGT
AAGCCAGTTACTTGGAACAGCCCATGGGTTGTGT
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