CF417599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL14_ORYSJ (Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.178e-49 Identity = 99/211 (46.92%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSK--LPI-DNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 +++ GL Y+VFI+I+LILGDGLYN +K++ T + SK LP+ DN + + + + D ++R +FLKD IP A GYV +AA+S T+P IF FCN+YG+GLTD SL+ TY K+ +F+ + G ++GGV+ GLAACGVMMSIVSTA+DLMQDFKTGYLTL+S +SMF+SQ++GT G Sbjct: 346 ISDNSLHGLQAYRVFISIALILGDGLYNFLKVLIRTIAGFISMVQNNSKGMLPVSDNGMSMSTAEEVSFDDERRTEIFLKDQIPKSVAYGGYVVVAALSIGTLPEIFPQLKWYYILVAYIVAPVLAFCNAYGSGLTDWSLASTYGKLAIFVFGAWAGLSHGGVLVGLAACGVMMSIVSTASDLMQDFKTGYLTLASPRSMFISQVIGTGMG 556 HSP 2 Score: 30.0314 bits (66), Expect = 6.178e-49 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I++ G WYP D+ Sbjct: 328 GVMWPLIAKKKGSWYPADI 346
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL11_ORYSJ (Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.948e-48 Identity = 100/212 (47.17%), Postives = 129/212 (60.85%), Query Frame = 1 Query: 55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKE--LCNKRTKVSKLPI-DNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 TL GL YKVFI I++ILGDGLYN +K+ T K + K + LPI DN + D K+R +FLKD IP A GYV LA I++ +P I FCN+YG+GLTD SL+ TY K+ +F+ + G ++GGV+ GLAACGVMM+IV TA+DLMQDFKTGY+TL+S +SMFVSQ++GTA G Sbjct: 331 TLPESSLLGLQAYKVFITIAVILGDGLYNFVKVFGYTIKGFIVMYKNKNSNTLPISDNGTPANATEEESFDDKRRNELFLKDQIPKTVAIGGYVVLAVITSGCLPLIIPQLKWYYILIAYIFAPIMAFCNAYGSGLTDWSLATTYGKLAIFVFGAWAGASHGGVLVGLAACGVMMNIVGTASDLMQDFKTGYMTLASPRSMFVSQVIGTAMG 542 HSP 2 Score: 29.6462 bits (65), Expect = 3.948e-48 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP IS+ G WYP L Sbjct: 314 GIMWPLISKKKGSWYPETL 332
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL8_ORYSJ (Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 3.949e-48 Identity = 106/212 (50.00%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTK-VSKLPIDNEIQD---TESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L GL GY+VFI+I++I+GDGL+N I+ T +L KR SK P + TE L D ++R VFLKD IPT AA+ YV LAAIS IP IF FCN+YG GLTD SLS +Y K+ +FI + +G +GGV+AGLAACG+MM IVSTA+DL+QDFKTGYLTL+S +SMFVSQ+LGT G Sbjct: 306 LPKSSLHGLNGYQVFISIAMIVGDGLFNFFSIVLRTAYDLYLKRRGGASKQPQETPFAGATGTERQVLSFDDRRRTQVFLKDQIPTTIAAAAYVLLAAISVVAIPHIFRQLRPKHVVWAYVVAPLFAFCNAYGTGLTDWSLSSSYGKLAIFIFGANIGAKDGGVVAGLAACGLMMGIVSTASDLVQDFKTGYLTLTSPRSMFVSQVLGTGMG 517 HSP 2 Score: 27.7202 bits (60), Expect = 3.949e-48 Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WPYI G WY L Sbjct: 288 GIMWPYIESKKGSWYDAGL 306
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL1_ARATH (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 3.288e-47 Identity = 93/207 (44.93%), Postives = 130/207 (62.80%), Query Frame = 1 Query: 58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 L + K +YGYKVF++++LILGDGLY +KI+ VT + N ++ P N++ D + D K+ EN FL+D IP WFA SGY+ AA+ST +P IF FCN+YGAGLTD +++ Y KIGLF+IA++ G GV+AGLA CG++ S+VS + LMQDFKT + T++S K+MF SQ++GT G Sbjct: 315 LDEHNMKSIYGYKVFLSVALILGDGLYTFVKILFVT---IANVNARLKNKP--NDLDDVGHKKQRKDLKEDEN-FLRDKIPMWFAVSGYLTFAAVSTVVVPLIFPQLKWYYVIVAYIFAPSLAFCNAYGAGLTDINMAYNYGKIGLFVIAAVTGRENGVVAGLAGCGLIKSVVSVSCILMQDFKTAHYTMTSPKAMFASQMIGTVVG 515 HSP 2 Score: 25.7942 bits (55), Expect = 3.288e-47 Identity = 7/19 (36.84%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP + + G W+P +L Sbjct: 297 GLMWPLLDKLKGSWFPDNL 315
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL9_ORYSJ (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.341e-45 Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 76 KGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 K L GYK FI ++LILGDGLYN +KI+++T K L + SKL + +D ++D+ R VF D IP+W A SGY+GL I+ IP +F FCN+YGAGLTD +++ Y KI LFI+A+ G + GV+AGL CG++ S+VS +ADLM DFKTG+LTL+S +SM ++Q +GT G Sbjct: 333 KSLQGYKAFICVALILGDGLYNFVKIVALTIKNLFDS----SKLKNAKKGEDMP----VLDELHRNEVFTTDNIPSWLAFSGYLGLTFIAVIAIPMMFHEMKWYYVVIAYLLAPALGFCNAYGAGLTDINMAYNYGKIALFILAAWAGKDSGVVAGLVGCGLVKSLVSISADLMHDFKTGHLTLTSPRSMIIAQAIGTVMG 525 HSP 2 Score: 29.261 bits (64), Expect = 1.341e-45 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP IS GDWY D+ Sbjct: 309 GVMWPLISDLKGDWYSADI 327
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL2_ARATH (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.748e-45 Identity = 93/209 (44.50%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKREN-VFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 TL + +GL GYKVFI I+LILGDGLYN +KI+ T + ++ +K + I ++ E S D KREN VF+++ IP W A GY+ + +S IP +F FCN+YGAGLTD +++ Y K LF++A+L G N GV+AG+ ACG++ SIVS +ADLM DFKTG+LT +S +SM V+Q +GTA G Sbjct: 299 TLKDNSMQGLNGYKVFICIALILGDGLYNFVKILFFTGRSFHSRLSKTNS--ISTLVEVPEDSTKESDNLKRENEVFVRESIPLWMACVGYLFFSLVSIIAIPLMFPQLKWYFVLVAYLLAPSLSFCNAYGAGLTDMNMAYNYGKAALFVMAALAGKNDGVVAGMVACGLIKSIVSVSADLMHDFKTGHLTQTSPRSMLVAQAIGTAIG 505 HSP 2 Score: 26.9498 bits (58), Expect = 1.748e-45 Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I++ G+W+P L Sbjct: 282 GIMWPLIARLKGEWFPATL 300
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL3_ARATH (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.192e-44 Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 55 TLANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 TL K L GYKVFI+ISLILGDGLY IKI+ FK N K++ ++ ++E + I KR+ +F++D IP W AA GY + +S IP +F F N+YGAGLTD +++ Y K+ LFI+A++ G GV+AGL CG++ SIVS ++DLM DFKTG+LTL+S +SM VSQ +GTA G Sbjct: 311 TLPENSMKSLNGYKVFISISLILGDGLYQFIKIL---FKTGINMYVKLNNR--NSGKSNSEKDKQSIADLKRDEIFVRDSIPLWVAAVGYAAFSVVSIIAIPIMFPELKWYFIVVAYMLAPSLGFSNAYGAGLTDMNMAYNYGKVALFILAAMAGKQNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIG 513 HSP 2 Score: 26.9498 bits (58), Expect = 4.192e-44 Identity = 9/19 (47.37%), Postives = 11/19 (57.89%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G +WP I GDW+P L Sbjct: 294 GIMWPLIKGLKGDWFPSTL 312
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL17_ORYSJ (Probable metal-nicotianamine transporter YSL17 OS=Oryza sativa subsp. japonica GN=YSL17 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.208e-43 Identity = 84/208 (40.38%), Postives = 124/208 (59.62%), Query Frame = 1 Query: 70 DFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKR----TKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGG-VIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 D G+ GY+VF+ +S+IL DGL+ ++ + T + +R T + +P + TE + D ++R VFL+D PTW A + Y LAA+S +P ++ FCN+YG G+TD +LS TY KI + + +S VG +GG V+AGLAACG+++S VS ++D MQDFKTGYLTL+S ++M V Q+ GTA G Sbjct: 313 DLGGIMGYRVFVGVSMILADGLFTILSALVRTACAMRKRRRGASTVTAAVPPFQCLSATERTMQSFDDRRRAQVFLRDSFPTWVAVASYAALAALSVVAVPLLYPQLGHRHVAAAYVAAPVFAFCNAYGVGVTDMNLSATYGKIAMMVFSSWVGMDGGGVVAGLAACGIIVSAVSGSSDFMQDFKTGYLTLTSPRAMLVGQVAGTALG 520 HSP 2 Score: 31.5722 bits (70), Expect = 1.208e-43 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWYPXDL 59 G LWPYI AG W+P +L Sbjct: 291 GILWPYIETKAGRWFPENL 309
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL16_ORYSJ (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 5.919e-43 Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 79 GLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 GL+GYK FI I+L++GDG YN +K+I VT K + R + + ++N + D ++ + ID +R VF +D IPTW A +GY L+ I+ IP +F FCN+YG GLTD ++ Y KI LFI A+ G + GV+AGL CG++ +V +ADLM DFKTG+LTL+S +SM V Q++GT G Sbjct: 322 GLFGYKSFICIALLVGDGFYNFVKVIVVTLKSV---RERSRRRGLNNRVADADT--MAIDDMQRNEVFNRDNIPTWMAYTGYTLLSVIAVVLIPVMFRQVKWYYVIIAYLLAPALGFCNAYGTGLTDMNMGYNYGKIALFIFAAWAGKDDGVVAGLVGCGLVKQLVLISADLMHDFKTGHLTLTSPRSMLVGQVVGTLMG 516 HSP 2 Score: 25.409 bits (54), Expect = 5.919e-43 Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWY 47 G +WP I + G+WY Sbjct: 297 GIMWPLIGKQKGNWY 311
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL1_ORYSJ (Probable metal-nicotianamine transporter YSL1 OS=Oryza sativa subsp. japonica GN=YSL1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.348e-42 Identity = 94/214 (43.93%), Postives = 124/214 (57.94%), Query Frame = 1 Query: 73 FKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDN-----------EIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678 FKG+ GYKV + +S++LGD L+ L I+V + K + KL +D + D D+++R VFL DGIP FA +GYV LAA+STA +P IF FCNSY +GL D SL+ Y K+ +F++ + VG +GGVIAGLAACGVMM ++ AA+LM DFKT YLTL+S SMF SQ +GTA G Sbjct: 302 FKGINGYKVPMGVSMVLGDCLFQL-GAITVKAVQHYRKGRQEQKLAVDGAADDGGGGCVPDDDDENKWHATYDERRRNQVFLSDGIPDQFAVAGYVALAALSTALVPRIFPQIRYHHVAVCYAVAPLLAFCNSYTSGLMDWSLATVYGKLAIFVVGASVGAASGGVIAGLAACGVMMVVIGDAAELMHDFKTAYLTLTSPVSMFASQAIGTALG 514 HSP 2 Score: 25.7942 bits (55), Expect = 8.348e-42 Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 3 GFLWPYISQHAGDWY 47 GF+WP + G+WY Sbjct: 280 GFIWPALQAKQGEWY 294 The following BLAST results are available for this feature:
BLAST of CF417599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417599 ID=CF417599; Name=CF417599; organism=Citrus sinensis; type=EST; length=684bpback to top |