CF417599

Overview
NameCF417599
Unique NameCF417599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL15_ORYSJ (Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.137e-41
Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1
Query:   82 LYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            LYGYK F+ I+LI+GDGLY+ +K+  VT K L N+  + S   + N   + E   + +D  +R+ VF +  +P+W A SGY  L+ I+  TIP +F                   F NSYGAGLTD ++   Y KI LF+ A+  G + GVIAGL    ++  +V  +ADLM D KTG+LTL+S +SM V +L+GT  G
Sbjct:  319 LYGYKSFLCIALIMGDGLYHFVKVTGVTAKSLHNRFNRKS---VSNTASE-EGDMVSLDDLQRDEVFKRGTVPSWMAYSGYFLLSIIAVITIPIMFRQVKWYYVIIAYALGPVLGFANSYGAGLTDINMGYNYGKIALFVFAAWAGKDNGVIAGLVVGTLVKQLVLVSADLMHDLKTGHLTLTSPRSMLVGELIGTGIG 513          

HSP 2 Score: 35.4242 bits (80), Expect = 3.137e-41
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP IS+H GDWYP ++
Sbjct:  293 GIMWPLISKHKGDWYPANI 311          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YS1_MAIZE (Iron-phytosiderophore transporter yellow stripe 1 OS=Zea mays GN=YS1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.506e-40
Identity = 78/201 (38.81%), Postives = 111/201 (55.22%), Query Frame = 1
Query:   76 KGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            K LYGYK F+ I+LI+GDG Y+  K+  VT K L     ++S+    N + +       +D  +R+ +F     P W A +GY  L  +S   IP +F                   F NSYG GLTD +++  Y KI LFI A+  G + GVIAGLA   ++  +V  +ADLM DFKTG+LT++S +S+ V+Q +GTA G
Sbjct:  326 KSLYGYKAFLCIALIMGDGTYHFFKVFGVTVKSL---HQRLSRKRATNRVANGGDEMAALDDLQRDEIFSDGSFPAWAAYAGYAALTVVSAVIIPHMFRQVKWYYVIVAYVLAPLLGFANSYGTGLTDINMAYNYGKIALFIFAAWAGRDNGVIAGLAGGTLVKQLVMASADLMHDFKTGHLTMTSPRSLLVAQFIGTAMG 523          

HSP 2 Score: 31.5722 bits (70), Expect = 7.506e-40
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G LWP IS+  G+WYP ++
Sbjct:  302 GILWPLISKQKGEWYPANI 320          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL2_ORYSJ (Metal-nicotianamine transporter YSL2 OS=Oryza sativa subsp. japonica GN=YSL2 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 2.818e-39
Identity = 80/199 (40.20%), Postives = 114/199 (57.29%), Query Frame = 1
Query:   82 LYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            L+GYK F+ ++LI+GDGLY+ IK+  +T K L  +  +       +  + T+    +I   +R+  F KD IP W A +GY  L+ ++   IP +F                   F N+YG GLTD ++S  Y KI LFI A+  G + GVIAGL  CG++  +V  +ADLM DFKTG+LTL+S +SM V Q +GTA G
Sbjct:  323 LFGYKSFMCVALIMGDGLYHFIKVTGITAKSLHERSNR------RHAKKATDEDTFVIADMQRDEFFNKDYIPNWLAYAGYALLSIVAVIAIPIMFQQVKWYYVVVAFVLAPVLGFSNAYGTGLTDMNMSYNYGKIALFIFAAWGGRDNGVIAGLVGCGIVKQLVQVSADLMHDFKTGHLTLTSPRSMLVGQAIGTAMG 515          

HSP 2 Score: 27.7202 bits (60), Expect = 2.818e-39
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G +WP IS   G WYP ++
Sbjct:  297 GIMWPLISIQKGKWYPGNV 315          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL18_ORYSJ (Probable metal-nicotianamine transporter YSL18 OS=Oryza sativa subsp. japonica GN=YSL18 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.586e-37
Identity = 79/208 (37.98%), Postives = 118/208 (56.73%), Query Frame = 1
Query:   58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVG-TNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            L   + K   GYKVF AI++ILGDG++ L+ I   T   + + +     L   +++       +  D ++R  VFL++ IP+ FA SGYV LA +ST  IP ++                   FCN+YG G+ + + S  Y K+ + + AS +G  NGG++  L  CG++ SIVSTA+D M DFKT YLTL+S ++  VSQ++GTA G
Sbjct:  296 LQETNLKSFSGYKVFCAIAMILGDGIFQLVAISLRTIHTVRHHQVAAETLRSFSDVDAMPRPVMSFDDRRRTQVFLREHIPSTFAISGYVVLATVSTVVIPLMYGQVRYYHVAAAYAFAPVLAFCNAYGTGVAETNFSAQYNKLVILMFASWIGIKNGGIVGSLVICGIVSSIVSTASDFMSDFKTSYLTLTSPRATLVSQVIGTAMG 503          

HSP 2 Score: 23.483 bits (49), Expect = 5.586e-37
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDL 59
            G + PYI    G WY  DL
Sbjct:  278 GIMRPYIRSKRGIWYDADL 296          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL7_ORYSJ (Probable metal-nicotianamine transporter YSL7 OS=Oryza sativa subsp. japonica GN=YSL7 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.191e-33
Identity = 79/213 (37.09%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   58 LANXDFKGLYGYKVFIAISLILGDGLYNLIKIISVTFKELCNKRTKVSKLPIDNE-----IQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGT-NGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            L      G+ GYKVFI +S+I+ D L+  + I+  T   +  +R +  +    N      I   +      D ++R  VFL+D IP       YV L+ IS A IP ++                   FCN+YG G+TD +L+ TY KI +F   S VG  +GGV+A L A G+ MSI+  AAD+ QD KTGYLTL+S +++F+S+ +GTA G
Sbjct:  293 LGPNSLNGIRGYKVFIGLSMIMADCLFVFLCIMVRTTCAMIKRRRQAMQGGGGNAQPFQGIDIADQPVKSFDDRRRAQVFLRDEIPDSVTIGCYVLLSIISIAAIPHLYPQMRYSHVALIYLAAPVFAFCNAYGFGVTDMNLASTYCKIAMFAFGSWVGIKSGGVVAALVAGGITMSILGNAADVAQDLKTGYLTLTSPRAVFISEAIGTALG 505          

HSP 2 Score: 32.3426 bits (72), Expect = 1.191e-33
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXDLG 62
            G +WPYI    G WYP +LG
Sbjct:  275 GVIWPYIESKEGIWYPSNLG 294          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL3_ORYSJ (Probable metal-nicotianamine transporter YSL3 OS=Oryza sativa subsp. japonica GN=YSL3 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.015e-28
Identity = 73/203 (35.96%), Postives = 109/203 (53.69%), Query Frame = 1
Query:   79 GLYGYKVFIAISLILGDGLYNLIKII---SVTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAHG 678
            G  GYKVFI+++LI+ DG+ N + +I   S+ F +L     K   L + N  +   S  L  D +KR  VFL + IP     + Y+  AAIST  IP +F                   FCN+Y  GLTD S++ TYAK   F+ A+ +   G V+A L A GV+++ +  ++  MQD K+G++TL+S ++M   Q+ G A G
Sbjct:  303 GQNGYKVFISVTLIITDGMINFLTLITTASINFYQL----RKEHDLGLANYFKKHPS--LNYDDRKRIEVFLANRIPIPVPVAAYITCAAISTIAIPAMFNQIKFYHLAVLYMVIPVVTFCNTYATGLTDWSVAPTYAKFTTFVFAAWIAKPGAVVASLLASGVIVAALHISSQAMQDLKSGHMTLTSPRAMVTGQIFGVAVG 499          

HSP 2 Score: 25.7942 bits (55), Expect = 1.015e-28
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXD 56
            GFL+P++    G WY  D
Sbjct:  279 GFLYPFLETKRGQWYQTD 296          
BLAST of CF417599 vs. ExPASy Swiss-Prot
Match: YSL4_ORYSJ (Probable metal-nicotianamine transporter YSL4 OS=Oryza sativa subsp. japonica GN=YSL4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.419e-27
Identity = 64/201 (31.84%), Postives = 106/201 (52.74%), Query Frame = 1
Query:   79 GLYGYKVFIAISLILGDGLYNLIKIIS---VTFKELCNKRTKVSKLPIDNEIQDTESSRLLIDQKKRENVFLKDGIPTWFAASGYVGLAAISTATIPTIFXXXXXXXXXXXXXXXXXXXFCNSYGAGLTDCSLSLTYAKIGLFIIASLVGTNGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTA 672
            GL GYKVFI+++LI+ DGL N + +++   + F  +  ++ + S L        +++  +  D++KR  +FL   IP +   + YV   AIS   +P +F                   FCN+Y  GLTD S+S TYAK   FI A+ +   G ++A L   G+ M+ +  ++  MQD K+ ++TL+S ++M   Q+ G A
Sbjct:  302 GLNGYKVFISVTLIVTDGLINFLILVTSAAINFYHIRQQQQQTSGLAS----YISKNPSMNYDERKRIEMFLSSKIPMFVPVAAYVAWTAISMVAMPAMFDQIKYYHVGVLYLAIPVVGFCNTYATGLTDWSVSNTYAKFSPFIFAAWIARPGAIVASLLVSGITMASLHVSSQAMQDLKSAHMTLTSPRAMIAGQVFGVA 498          

HSP 2 Score: 27.7202 bits (60), Expect = 1.419e-27
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:    3 GFLWPYISQHAGDWYPXD 56
            GFL+PY+    G+WY  D
Sbjct:  278 GFLYPYLETKHGEWYQTD 295          
The following BLAST results are available for this feature:
BLAST of CF417599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
YSL15_ORYSJ3.137e-4141.21Iron-phytosiderophore transporter YSL15 OS=Oryza s... [more]
YS1_MAIZE7.506e-4038.81Iron-phytosiderophore transporter yellow stripe 1 ... [more]
YSL2_ORYSJ2.818e-3940.20Metal-nicotianamine transporter YSL2 OS=Oryza sati... [more]
YSL18_ORYSJ5.586e-3737.98Probable metal-nicotianamine transporter YSL18 OS=... [more]
YSL7_ORYSJ1.191e-3337.09Probable metal-nicotianamine transporter YSL7 OS=O... [more]
YSL3_ORYSJ1.015e-2835.96Probable metal-nicotianamine transporter YSL3 OS=O... [more]
YSL4_ORYSJ1.419e-2731.84Probable metal-nicotianamine transporter YSL4 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-529 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417599 ID=CF417599; Name=CF417599; organism=Citrus sinensis; type=EST; length=684bp
GGGGTTTTCTCTGGCCCTATATCTCCCAACATGCTGGTGACTGGTATCCA
NCTGACCTTGGCTAATANTGATTTTAAAGGNCTTTATGGATATAAGGTCT
TCATAGCTATTTCCCTTATCCTTGGGGATGGTCTTTACAATCTGATAAAG
ATAATCTCTGTAACTTTCAAGGAATTGTGCAACAAAAGAACCAAAGTTAG
CAAACTTCCAATTGATAATGAGATTCAAGATACTGAGAGTTCCAGATTGC
TAATAGATCAGAAAAAACGAGAGAATGTATTTCTAAAAGATGGGATACCC
ACCTGGTTTGCTGCTTCTGGATATGTGGGCCTGGCAGCTATATCAACAGC
AACAATTCCCACCATCTTTCCACCTCTCAAGTGGTACTTAGTTCTCTTGT
TATACCTTATTGCCCCAGCCCTAGCCTTCTGCAACTCTTATGGGGCGGGA
CTTACAGACTGCAGCTTATCTTTAACCTATGCAAAAATTGGGCTTTTCAT
CATTGCTTCTTTGGTTGGAACCAATGGTGGGGTTATTGCTGGGTTAGCAG
CTTGTGGGGTTATGATGTCCATTGTCTCTACTGCAGCTGATCTCATGCAG
GATTTTAAGACAGGTTACCTCACTCTATCATCAGCCAAGTCTATGTTTGT
AAGCCAGTTACTTGGAACAGCCCATGGGTTGTGT
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