CF417601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 3 Query: 9 GSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 227 GSH +++ +KL+D L E+V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++AIGLAPRAVEKC Sbjct: 166 GSH----QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKC 231
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 27 GREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 G++ LSES+ KD E+VLTYEDKDGDWMLVGDVPWEMF +C+RLRIMK +DAIGLAPRAV+K Sbjct: 192 GKDGLSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDK 252
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 42/73 (57.53%), Postives = 58/73 (79.45%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVE 221 ++ SH + + E KL D ++G+E+V TYEDKDGDWMLVGDVPW+MF+ TC+RLR+MKS++A+ LAPRA + Sbjct: 127 KFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRA 215 ++ SH + + E KL D + G+E+V TYEDKDGDWMLVGDVPW+MF+ TC+RLR+MKS++A+ LAPR+ Sbjct: 141 KFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 3 Query: 78 EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 E+VLTYEDKDGDWMLVGDVPWEMF +C+RLRIMK +DAIGLAPRA EK Sbjct: 210 EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEK 258
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 6 YGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 +G+ A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK ++AIGLAPRA +K Sbjct: 166 FGTFTATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 6 YGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 +G+ A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK ++AIGLAPRA +K Sbjct: 166 FGTFTATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 37/55 (67.27%), Postives = 50/55 (90.91%), Query Frame = 3 Query: 48 SKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPR 212 +KL DL+ G+E+V TYEDKDGDWMLVGDVPW+MF+ +CKR+R+MKS++A+ L+PR Sbjct: 135 TKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 12 SHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 SH R+ L++ D L E+VLTYEDKD DWMLVGD+PW++F +C++LRIM+ +DA G+APR++E+ Sbjct: 206 SHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16 Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 Q G + R+ L+ D L E+VLTYEDKD DWMLVGD+PW++F C++L+IM+ +DA G+APR++E+ Sbjct: 193 QSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266 The following BLAST results are available for this feature:
BLAST of CF417601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417601 ID=CF417601; Name=CF417601; organism=Citrus sinensis; type=EST; length=681bpback to top |