CF417601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 75 SEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 203 S+F +TYEDKDGD MLVGDVP+EMFI TCKRLRIMK ++A GL Sbjct: 150 SDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 72 GSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA 194 GS FV TYEDKDGDWMLVGDVPW+MF +C++LRIMK ++A Sbjct: 124 GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 54 LKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIG 200 LKD +E V YEDKDGDWMLVGDVPWEMF +CKRLRIMK +DA G Sbjct: 123 LKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 3 Query: 78 EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRA 215 E + YED DGDWMLVGDVPWEMF+ +CKR+R+M++ +A GL+ A Sbjct: 95 EHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 75 SEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL-APRAVE 221 SEF +TY+DKDGD MLVGDVP++MF TCK+LRIMK ++A GL +PR ++ Sbjct: 176 SEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 18 GALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIG 200 G LG + E K E+++ YEDKD DWMLVGDVPW+MF +CKRLRI+K +DA G Sbjct: 129 GCLGIGVAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 78 EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA 194 +F + YEDKDGD MLVGDVPWEMFI +CK+LRIMK ++A Sbjct: 180 QFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218 The following BLAST results are available for this feature:
BLAST of CF417601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417601 ID=CF417601; Name=CF417601; organism=Citrus sinensis; type=EST; length=681bpback to top |