CF417607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36 Identity = 76/164 (46.34%), Postives = 107/164 (65.24%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAGKL+EA + I KM + PT SVW LL+ C +H N ELA A+++F + + G VL+ N YA+ GRW++ AK R +R +G++K+ SW+E N+ H FV+GDR H +I + L+ + E+MEK GYV DTS VL VD + K + + HSERLA+A Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.518e-36 Identity = 75/164 (45.73%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 G +G +EA +I M + P +W +LL C++HGN EL A+ + ++ +PG VLLSN YA+AGRW + AK R +L D+G+KK G S +E + VH F+ GD+ H R REIY LEE+ +EKAG+VPDTS VL++++ + K +R+HSE+LAIA Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36 Identity = 72/163 (44.17%), Postives = 106/163 (65.03%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAI 679 GRA L+EA+ VIE MP+A +WG+L++ CRIHG EL +AA R+ EL G VL+SN YA RWED R+++ ++ V KE GLS +++ + H F+ GD+ H ++ EIY KL+E+ +++ AGYVPD VL V+ +EK + +HSE+LA+ Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLAL 654
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36 Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKL-EELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLA 676 GRAGK++EA+ VIE MP P+ S+WG+LL CR+HGN + AA +F L +PG V++SN YA A W++ K R+M++ +GVKKE G SWV+ +++ FVAG R + Y+K+ EL E +EK+GY P+TS VL VD + K + HSERLA Sbjct: 485 GRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLA 647
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.739e-35 Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG L +A +I MP+ P VWGALL+GCR+ +T+LA + L + G V LSN Y+ GRW++AA+ R M+ +G+KK G SW+E +VH F+A D+ H + +IY KLE+LG EM G+VP T FV V+ +EK + + YHSE+LA+A Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.672e-35 Identity = 74/164 (45.12%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDE-KNQTIRYHSERLAI 679 GR+G L++A+ IE MPI P+ SVWGALL C+IH N LA A R+ EL + G +VLLSN YA G+WE+ ++ RK +R G+KKE G S +E +H F++GD H + ++Y KL E+ E+++ GY P+ S VL+ ++ +E K Q++ HSE+LAI Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAI 679 GRAG L EA +I+ +P PT S+WG+LL CR++ N ELA AA+++FEL + G +VLLSN YAA +WE+ AK+RK+LRD VKK G SW++ ++VHTF G+ H R REI L+ L + K GY P L V+ +K + + HSE+LA+ Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLAL 573
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 72/170 (42.35%), Postives = 106/170 (62.35%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GRAG+L+ A+ I+ M + P S+WGALL+ CR+HGN +L A++ +FE+ G +VLLSN YA+AG+WE + R + +G++K G S +E N+V F G++ H E+Y++L L +++ GYVPD FVL+ V+ DEK + HSERLAIA Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIA 762
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.968e-35 Identity = 75/172 (43.60%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 170 ICSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEK-AGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 +C GRA + EA ++ M PT VW ALL CR H E+ AA R+ EL +PG VL+SN +A GRW D K R ++ G++K G SW+E +VH F A D+ H ++EIY+KL E+ ++E+ GYV DT FVL VD EK Q + HSER+AIA Sbjct: 728 VCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIA 899
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.041e-34 Identity = 79/172 (45.93%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGC-RIHGN-TELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GRAG+L + IEKMP+ P +W +L C R +G EL AA+ +F+L + VLL N YAA GRWED KARK ++D VKKE G SWV + VH FVAGD+ H IY+KL+EL +M AGYVP T F L ++ + K + + YHSE+LA+A Sbjct: 762 CMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVA 933 The following BLAST results are available for this feature:
BLAST of CF417607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417607 ID=CF417607; Name=CF417607; organism=Citrus sinensis; type=EST; length=683bpback to top |