CF417636

Overview
NameCF417636
Unique NameCF417636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_HAEIE (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittEE) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 462
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  223 FFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 462
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  223 FFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ERWT9 (S-adenosylmethionine synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 82/152 (53.95%), Postives = 102/152 (67.11%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +H+NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KI  + +  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  223 YHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKISTETLTLLVREFFDLRPHGLIQMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 78/152 (51.32%), Postives = 103/152 (67.76%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD G+TGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  223 FFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 78/152 (51.32%), Postives = 103/152 (67.76%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD G+TGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  223 FFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 78/152 (51.32%), Postives = 103/152 (67.76%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD G+TGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  223 FFINPTGRFVIGGPMGDCGVTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  223 YFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  223 YFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 82/159 (51.57%), Postives = 106/159 (66.67%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 477
            + + PSGRFVIGGP GDAGLTGRKII+D Y             KD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D EI++I+K++FD RPG++   LDL R     +L TA+YGHF   + +++WE  K L++
Sbjct:  231 YFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDDEIIEIIKKNFDLRPGVLVKELDLAR---PIYLPTASYGHF--TNQEYSWEKPKKLEF 384          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37
Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 474
            FH+NP G F++GGP GDAG+TGRKII+DTY             KDPTKVDRS AY  R  A S+V  GLA+R +VQ+SYAIG+ +P+SV V ++GT  + D+E+ +IV++SFD  PG +   LDLKR     + KTA  GHFG    +F WE  K LK
Sbjct:  229 FHINPCGTFIVGGPMGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVATSLVKAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDLKR---PIYEKTAENGHFGHS--EFPWEQPKALK 381          
The following BLAST results are available for this feature:
BLAST of CF417636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HAEIE1.685e-3752.60S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEI81.685e-3752.60S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_ERWT91.685e-3753.95S-adenosylmethionine synthetase OS=Erwinia tasmani... [more]
METK_BUCAT1.685e-3751.32S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI1.685e-3751.32S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA51.685e-3751.32S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_ACTPJ1.685e-3751.97S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP71.685e-3751.97S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK2_YEAST1.685e-3751.57S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK1_CAEEL1.685e-3751.27Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-566 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417636 ID=CF417636; Name=CF417636; organism=Citrus sinensis; type=EST; length=677bp
TTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGA
TGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGG
GAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGAT
AGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAA
CGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGC
CTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCT
GACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGG
AATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCT
TGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACT
TGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTG
AGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTA
GTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGC
AAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCT
TTTTCTTCTTTCCCCACTTCTTTTTTG
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