CF417660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 9.109e-110 Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETT+YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R++EIVKEVSSYLKKVG P + + P GDNMI+RSTNLDWYKGPTLL+ALD I+EPK Sbjct: 12 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFI-PISGFEGDNMIDRSTNLDWYKGPTLLEALDQISEPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 1.190e-109 Identity = 196/217 (90.32%), Postives = 202/217 (93.09%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTTGHLIYKLGGIDKRVIE FEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETT+Y CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK MICCCNKMDATTPKYSK+RYDEIVKEVSSYLKKVG P + P + P GDNMIERS+NLDWYKGPTLL+ALD INEPK Sbjct: 12 VIGHVDSGKSTTTGHLIYKLGGIDKRVIESFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYSCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKHMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFV-PISGFEGDNMIERSSNLDWYKGPTLLEALDQINEPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 1.554e-109 Identity = 196/217 (90.32%), Postives = 203/217 (93.55%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETT+Y CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG F+AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+RYDEIVKEVSSYLKKVG P + P + P GDNMIERS+NLDWYKGPTLL+ALD INEPK Sbjct: 12 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYSCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGVFQAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFV-PISGFEGDNMIERSSNLDWYKGPTLLEALDQINEPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 4.231e-107 Identity = 193/217 (88.94%), Postives = 201/217 (92.63%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTT H+IYKLGGIDKRVIERFEKEA EMNKRSFKYAW+LDKLKAERERGITIDIAL KFETT+YY TV+DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK RY+EIVKEVSSYLK+VG P + P + P GDNMIERSTNLDWYKGPTLLDALDNINEPK Sbjct: 12 VIGHVDSGKSTTTVHVIYKLGGIDKRVIERFEKEADEMNKRSFKYAWLLDKLKAERERGITIDIALLKFETTKYYSTVMDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKEVGYNPDKIPFV-PISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2) HSP 1 Score: 335.495 bits (859), Expect = 1.461e-91 Identity = 165/217 (76.04%), Postives = 187/217 (86.18%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVD+GKSTTTGHLIYK GGIDKRVIE++EKEA+EM K+SFKYAWV+DKLKAERERGITIDIALWKFET++YY T+IDAPGHRDFIKNMITGTSQADCAVL+I S TG FEAGI+K+GQTREHALLA+TLGVKQMI NKMD + YS+ARYDEIVKEVSS++KK+G P E P GDNM+ERS ++WYKGPTLL+ALD I EPK Sbjct: 12 VIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMGKQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQARYDEIVKEVSSFIKKIGYNP-EKVAFVPISGWNGDNMLERSDKMEWYKGPTLLEALDAIVEPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 1.047e-89 Identity = 167/217 (76.96%), Postives = 180/217 (82.95%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA+EM K SFKYAWVLDKLKAERER ITIDIALWKFET + T+IDAPGHRDFIKNMITGTSQAD AVL+IDSTTGGFEAGISKDGQTREHALLA+TLGVKQMI NK D T KYS+ARY+EI KEVS YLKKVG P + P + P GDNMIE S N+ WYKG TL+ ALDN+ PK Sbjct: 12 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEASEMGKGSFKYAWVLDKLKAERERCITIDIALWKFETAKSVFTIIDAPGHRDFIKNMITGTSQADAAVLVIDSTTGGFEAGISKDGQTREHALLAYTLGVKQMIVATNKFDDKTVKYSQARYEEIKKEVSGYLKKVGYNPEKVPFI-PISGWNGDNMIEASENMGWYKGLTLIGALDNLEPPK 227
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 4.399e-88 Identity = 162/217 (74.65%), Postives = 178/217 (82.03%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEPK 653 VIGHVDSGKSTTTGHLIYK GGIDKRVIE+FEKE+AE K SFKYAWVLDKLKAERERGITIDI+LWKFET +Y+ T+IDAPGHRDFIKNMITGTSQAD A+L+I S G FEAGISKDGQTREHALLAFTLGVKQMI C NKMD T +S+ RY EI KE+S YLKKVG P P + P GDNM+ERSTN WYKGP L++ALD + PK Sbjct: 13 VIGHVDSGKSTTTGHLIYKCGGIDKRVIEKFEKESAEQGKGSFKYAWVLDKLKAERERGITIDISLWKFETAKYHFTIIDAPGHRDFIKNMITGTSQADVAILMIASPQGEFEAGISKDGQTREHALLAFTLGVKQMIVCLNKMDEKTVNFSEERYQEIKKELSDYLKKVGYKPDTIPFI-PISGFNGDNMLERSTNAPWYKGPILVEALDALEPPK 228
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.415e-86 Identity = 165/229 (72.05%), Postives = 183/229 (79.91%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYK-------------GPTLLDALDNINEP 650 VIGHVDSGKST+TGH+IYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFETT+Y T+IDAPGHRDFIKNMITGTSQADCAVLI+ S+TG FEAGISK+GQTREHALLAFTLGVKQMI NK+D T P YS+AR++EI KE+S+Y+KKVG P+ P L P GDNMIE S N+ WYK G TLL+ALDNI P Sbjct: 13 VIGHVDSGKSTSTGHMIYKCGGIDKRQIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETTKYVVTIIDAPGHRDFIKNMITGTSQADCAVLIVASSTGEFEAGISKNGQTREHALLAFTLGVKQMIVAVNKIDNTEPPYSEARFNEIKKEISAYVKKVGYDPKTVPVL-PVSGWHGDNMIEPSPNMSWYKGWEVEYKDTGKHTGKTLLEALDNIPLP 240
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3) HSP 1 Score: 318.546 bits (815), Expect = 1.848e-86 Identity = 158/216 (73.15%), Postives = 176/216 (81.48%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYKGPTLLDALDNINEP 650 V+GHVD+GKST TGHLIYK GGIDKR IE+FEKEAA++ K SFKYAWVLDKLKAERERGITIDIALWKFE+ + T+IDAPGHRDFIKNMITGTSQAD A+LII S G FEAGISKDGQTREHALLAFTLGVKQM+ CCNKMD T Y + RYDEIVKEVS+Y+KKVG E P +GDNMIE+S + WYKGPTLL+ALD + P Sbjct: 12 VVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAADIGKASFKYAWVLDKLKAERERGITIDIALWKFESPKSVFTIIDAPGHRDFIKNMITGTSQADAAILIIASAQGEFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVNYGQERYDEIVKEVSAYIKKVGYNV-EKVRFVPISGWQGDNMIEKSEKMPWYKGPTLLEALDMLEPP 226
BLAST of CF417660 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.118e-86 Identity = 162/228 (71.05%), Postives = 182/228 (79.82%), Query Frame = 3 Query: 3 VIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGIXPRESPHLCPSLXSRGDNMIERSTNLDWYK------------GPTLLDALDNINEP 650 VIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFETT+YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + G FEAGISK+GQTREHALLA+TLGVKQ+I NKMD+T P YS+ RYDEIVKEVS+Y+KK+G P P + P GDNM+E S N+ W+K G +LL+ALD I P Sbjct: 12 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFV-PISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPP 238 The following BLAST results are available for this feature:
BLAST of CF417660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417660 ID=CF417660; Name=CF417660; organism=Citrus sinensis; type=EST; length=653bpback to top |