CF417667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.194e-75 Identity = 136/159 (85.53%), Postives = 150/159 (94.34%), Query Frame = 1 Query: 1 ANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 474 A+LGDLRG AGGL+G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++PSLTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 230 ASLGDLRGLAGGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: PORA_HORVU (Protochlorophyllide reductase A, chloroplastic OS=Hordeum vulgare GN=PORA PE=1 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 5.925e-75 Identity = 135/159 (84.91%), Postives = 149/159 (93.71%), Query Frame = 1 Query: 1 ANLGDLRGFAGGLNGLNSSSMIDGGD-FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 474 A+LGDLRG AGGL+G + S+MIDG + FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++P LTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 230 ASLGDLRGLAGGLSGASGSAMIDGDESFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: POR_MARPA (Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.459e-73 Identity = 128/157 (81.53%), Postives = 144/157 (91.72%), Query Frame = 1 Query: 1 ANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGL 471 ANLG LRG AGGLNG+NSSSMIDGG+FDGAKAYKDSKVCNM TMQEFHRR+H ETGI F+SLYPGCIA TGLFR H+ LFR LFPPFQKYITKGYVSE+EAGKR+AQVVSDP L+KSGVYWSWNKDS SFEN+LS+EAS+ EKA+++WE+SE+L GL Sbjct: 301 ANLGHLRGLAGGLNGVNSSSMIDGGEFDGAKAYKDSKVCNMFTMQEFHRRYHAETGITFSSLYPGCIAETGLFRNHVTLFRTLFPPFQKYITKGYVSEEEAGKRMAQVVSDPKLSKSGVYWSWNKDSGSFENELSEEASNPEKAKRLWELSERLSGL 457
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 105/158 (66.46%), Postives = 129/158 (81.65%), Query Frame = 1 Query: 1 ANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 474 ANLGDL G A G+ N M+DG +F+GAKAYKDSKV M+T+++ H+RFH+ TGI FASLYPGCIA TGLFREH+PLF+ LFPPFQKYITKGYVSE+EAG+RLA V+SDP L KSG YWSW+ + SF+NQ+S+E +D KA K+W+IS KLVGL+ Sbjct: 241 ANLGDLSGLAAGVPAANP--MMDGQEFNGAKAYKDSKVACMMTVRQMHQRFHDATGITFASLYPGCIAETGLFREHVPLFKTLFPPFQKYITKGYVSEEEAGRRLAAVISDPKLNKSGAYWSWSSTTGSFDNQVSEEVADDSKASKLWDISAKLVGLS 396
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: POR_PLEBO (Light-dependent protochlorophyllide reductase OS=Plectonema boryanum GN=por PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.141e-44 Identity = 87/162 (53.70%), Postives = 115/162 (70.99%), Query Frame = 1 Query: 1 ANLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW----NKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 474 A+LGDL G G +MIDG F KAYKDSK+CNM+T +E HRR+H+ TGI F +LYPGC+A T LFR +P+F+ +FP FQK IT GYVS++ AG+R AQVV+DP +SGV+WSW + SF +LS++ +D KA+++WE+SEKLVGLA Sbjct: 163 ADLGDLSGLEAGFKA--PIAMIDGKPFKAGKAYKDSKLCNMITSRELHRRYHDSTGIVFNTLYPGCVADTPLFRNSLPVFQKVFPWFQKNITGGYVSQELAGERTAQVVADPEFKQSGVHWSWGNRQKEGRESFVQELSEKVTDDAKAKRMWELSEKLVGLA 322
BLAST of CF417667 vs. ExPASy Swiss-Prot
Match: POR_SYNY3 (Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803) GN=por PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 7.064e-44 Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 4 NLGDLRGFAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSW-NKDSA---SFENQLSQEASDVEKARKVWEISEKLVGL 471 +LG+ GF G +MI+ F KAYKDSK+CNMLT +E HRRFH+ETGI F SLYPGC+A T LFR H LFR +FP FQK +TKGYVS++ AG+R+A VV+D SGV+WSW N+ A +F +LS++ SD +KA+++W++SEKLVGL Sbjct: 164 DLGNFEGFEAGFK--KPIAMINNKKFKSGKAYKDSKLCNMLTTRELHRRFHQETGIVFNSLYPGCVADTPLFRNHYSLFRTIFPWFQKNVTKGYVSQELAGERVAMVVADDKFKDSGVHWSWGNRQQAGREAFVQELSEQGSDAQKAQRMWDLSEKLVGL 321 The following BLAST results are available for this feature:
BLAST of CF417667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417667 ID=CF417667; Name=CF417667; organism=Citrus sinensis; type=EST; length=675bpback to top |