CF417675

Overview
NameCF417675
Unique NameCF417675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11
Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            E++ T + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    W+FWV P +GAL  A  ++ I
Sbjct:  137 EVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 279
            EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   +   +  +W++WVGP + G LA   Y
Sbjct:  146 EIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAAD---FAGNWVYWVGPLIGGGLAGLVY 232          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            EI+ TF LVYTV++ A DPK  +    +  +AP+ IGF V    LA    +G  +NPA +FG AV+      W +HW++W GP +G   A   + ++
Sbjct:  149 EIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A+I      +  HW+FWVGP +GAL A+  + ++L
Sbjct:  148 ELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.202e-11
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    1 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            +EI+ T + +  +  ATD KR+ +       AP+ IG  + ++HL +IP+T T +NPARS  A  +Y  D A    W+FWV P VG +  A  ++ +L
Sbjct:  136 SEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARS-TAVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNLL 226          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.488e-11
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYIL 294
            EI+ TF LVYTV++ A DPK  +    +  +AP+ IGF V    LA    +G  +NPA +FG AV+      W +HW++W GP V G +A   Y  + +
Sbjct:  148 EIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEVFFI 239          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.488e-11
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            EI+   + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    W+FWV P +GAL  A  ++ I
Sbjct:  137 EIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.488e-11
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 1
Query:    1 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            AEI+ T + +  +  ATD +        P  APL IG A+ +++L +IPIT T +NPARS  A  I+ N  A +  W FWV P +G +     ++ +
Sbjct:  137 AEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARS-TAVAIFQNTWALEQLWFFWVMPIIGGIVGGGIYRLL 226          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.167e-11
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+ P +GA+  A  ++ I
Sbjct:  136 EVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVA-LFVGGWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.361e-11
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G   A+  + ++L
Sbjct:  134 EIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLASLLYDFLL 223          
The following BLAST results are available for this feature:
BLAST of CF417675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
AQPZ_VIBVU1.886e-1136.46Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
TIP22_MAIZE2.463e-1143.62Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP12_ARATH2.463e-1138.14Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQP6_HUMAN2.463e-1138.14Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQPZ_VIBPA4.202e-1136.73Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
TIP11_ARATH5.488e-1139.39Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQPZ_VIBVY5.488e-1136.46Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ_PHOLL5.488e-1136.08Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQPZ_CHRVO7.167e-1135.42Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
MIP_RABIT9.361e-1135.05Lens fiber major intrinsic protein OS=Oryctolagus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-605 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417675 ID=CF417675; Name=CF417675; organism=Citrus sinensis; type=EST; length=562bp
GCTGAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCAC
AGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCAC
TTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATC
ACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTA
CAACAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTT
TCGTTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCT
GCTGCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGA
AAGCAAATTATGATGAATATGAACCACCAACCAGAATAGCTTTATTTATC
TCTTTTTCCTTTCTCTCTTTCTGTTATTTGTTCGCTTGTGTCTATTATGA
GATGATGTTTGCTATGATAATTATGACCCTTCTCTTTATTTTTCCATTTC
ATATTTTGATTGAGTAGCTATAGCTTTGTCTCCGTGAATCATTGTTAATG
AGTAGTGGTGAT
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