CF417675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294 EIIGT LV V + TD +R RD + APL IGF+V + HL I TG GINPARSFG+AVI +N + DHW+FWVGPF+G A + +IL Sbjct: 144 EIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIGGALAVLIYDFIL 233
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 3.549e-18 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294 EIIGT LV V + TD +R RD + PL IGF+V + HL I TG GINPARSFG++VI +N + DHWIFWVGPF+GA A + +IL Sbjct: 144 EIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 234
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 46/96 (47.92%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 E+I TF LV+T+F++ D KR+ V L IGF+V + HL I TG +NPARSFG AVI N W++HWI+WVGP +GA+ A A ++Y+ Sbjct: 163 ELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 251
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294 EIIGT LV V + TD +R RD + PL IGF+V + HL I TG GINPARSFG++VI +N + DHWIFWVGPF+GA A + +IL Sbjct: 144 EIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 233
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.053e-18 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 E+I TF LV+T+F++ D KR+ + L IGF+V + HL I TG +NPARSFG AVI N W++HWI+WVGP +GA+ A A ++Y+ Sbjct: 166 ELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.761e-17 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 E+I TF LV+T+F++ D KR+ + L IGF+V + HL I TG +NPARSFG AVI N W++HWI+WVGP +GA+ A ++Y+ Sbjct: 163 ELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.761e-17 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 E+I TF LV+T+F++ D KR+ + L IGF+V + HL I TG +NPARSFG AVI N W++HWI+WVGP +GA+ A ++Y+ Sbjct: 163 ELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 E+I TF LV+T+F++ D KR+ + L IGF+V + HL I TG +NPARSFG AVI N W +HWI+WVGP +GA+ A A ++Y+ Sbjct: 163 ELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17 Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294 EIIGT LV V + TD +R RD + APL IG +V + HL I TG GINPARSFG+AVI +N + +HWIFWVGPF+G A + +IL Sbjct: 142 EIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17 Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294 EIIGT LV V + TD +R RD + APL IG +V + HL I TG GINPARSFG+AVI +N + +HWIFWVGPF+G A + +IL Sbjct: 142 EIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231 The following BLAST results are available for this feature:
BLAST of CF417675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417675 ID=CF417675; Name=CF417675; organism=Citrus sinensis; type=EST; length=562bpback to top |