CF417675

Overview
NameCF417675
Unique NameCF417675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1
Query:    1 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AVI +   +   HW+FWVGP VGA  AA  + Y+L
Sbjct:  134 AEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA  AA  + Y+L
Sbjct:  135 EMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAILYFYLL 225          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 297
            E + TF+LV+ V    D +RS     +   APL IG ++   HL+ I  TG  +NPARSFG AV+  N   W D W++WVGP VG + A A ++   +
Sbjct:  148 EALITFILVFVVHGVCDNRRS----DIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG AV+      WD+HW++W+GPFVGA  AA  +  I
Sbjct:  148 EIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   16 TFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 300
            TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG AV  N D  W +HW++W GP VG + A   ++ + RA
Sbjct:  155 TFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.396e-14
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E+I TF L   +F++TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N  +    HW+FWVGP VGA+ AA  + Y+L
Sbjct:  135 ELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.303e-14
Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARS   A++      +DDHW+FW+GP VGA+ A+  + Y+L
Sbjct:  134 ELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E++ T   +  VF++ D +   R    P  A LP+GF++ + HL  IP TG G+NPARSF  AVI  N   + +HW+FW GP +GA  AA  ++  L
Sbjct:  134 ELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRN---FTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 297
            E + TF+LV+ V + +DP R      +   APL +G A+   HL  I ++G  +NPARSFG AV+      W  HW++WVGP  G L A   ++ I +
Sbjct:  142 EALITFILVFVVKAVSDPGRQ----DIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQG---VWTYHWVYWVGPIAGGLLAGIIYRLIFK 232          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARS   AV+      +DDHW+FW+GP VGA+  +  + Y+L
Sbjct:  134 ELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
The following BLAST results are available for this feature:
BLAST of CF417675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
AQP5_SHEEP4.796e-1548.48Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_PIG6.264e-1546.94Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_AEDAE8.181e-1540.82Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP12_ORYSJ1.069e-1446.39Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP_CICVR1.069e-1442.11Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_HUMAN1.396e-1445.92Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP2_SHEEP5.303e-1440.21Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
MIP_CHICK6.926e-1441.24Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_DROME6.926e-1438.78Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQP2_HUMAN1.543e-1340.21Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-605 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417675 ID=CF417675; Name=CF417675; organism=Citrus sinensis; type=EST; length=562bp
GCTGAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCAC
AGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCAC
TTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATC
ACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTA
CAACAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTT
TCGTTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCT
GCTGCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGA
AAGCAAATTATGATGAATATGAACCACCAACCAGAATAGCTTTATTTATC
TCTTTTTCCTTTCTCTCTTTCTGTTATTTGTTCGCTTGTGTCTATTATGA
GATGATGTTTGCTATGATAATTATGACCCTTCTCTTTATTTTTCCATTTC
ATATTTTGATTGAGTAGCTATAGCTTTGTCTCCGTGAATCATTGTTAATG
AGTAGTGGTGAT
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