CF417675

Overview
NameCF417675
Unique NameCF417675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILR 297
            E + TF+LV+ V    D +R+     V   APL IG ++   HLA I  TG  +NPARSFG AV+  N   + D W++WVGP VG + A A ++   +
Sbjct:  147 EALITFMLVFVVHGVCDNRRT----DVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKAL 318
            E + TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++      W  HW++W+GPF+GA  A   ++Y++  +A  A+
Sbjct:  152 EAVMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAV 250          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
Query:   16 TFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 306
            TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++      W  HW++W+GPFVGA  A   ++Y++  +A
Sbjct:  157 TFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSA 247          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E+  T  LV  +F++TD +R       P L+   IGF+V + HL  I  TG  +NPARS   A++      +DDHW+FW+GP VGA+ A+  + Y+L
Sbjct:  134 ELFLTLQLVLCIFASTDERRGDNVG-TPALS---IGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13
Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            E++ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA SFG AV+      W++HW++WVGP  GA  AA  +  I
Sbjct:  148 EMVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            E+ GT VL  TV      KR         +A LPIG ++FM H+A    TGTG+NPARS GAAV       +  HWI+W+GP +GA  A +  Q +
Sbjct:  180 EMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLAWSVWQLL 268          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 294
            E + TF  VY  ++   DPKR     H+  +APL +GF +    LA  P  G G+NPAR FG A++      W  HW++W+GPF+GA  A   ++Y+L
Sbjct:  157 EAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291
            EI+ TF LVYTV++ A DPK+      + ++APL IG  V    L      G  +NPA SFG AV+      W +HW++WVGPF+GA  AA  +  I
Sbjct:  148 EIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1
Query:    4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYILRAAA 306
            EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARSFG AV   +   +  +WI+W GP + GALA   Y    + A A
Sbjct:  146 EIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITAHA 241          
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query:    4 EIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQY 288
            E++ TF L+YTV+ +A DPKR A    V  +APL IG  V    L   P  G  +NPA +FG +++      W  HWIFWVGP +GA  AA  ++Y
Sbjct:  148 EVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEY 236          
The following BLAST results are available for this feature:
BLAST of CF417675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
AQP_ANOGA2.015e-1340.82Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP31_MAIZE2.632e-1338.68Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP31_ORYSJ3.437e-1340.82Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQP2_BOVIN3.437e-1340.21Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP12_MAIZE4.489e-1343.30Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQY2_YEAST4.489e-1342.71Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
TIP32_MAIZE5.863e-1339.80Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP13_ARATH5.863e-1343.30Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP_ANTMA7.658e-1344.66Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIPA_PHAVU7.658e-1343.75Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-605 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417675 ID=CF417675; Name=CF417675; organism=Citrus sinensis; type=EST; length=562bp
GCTGAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCAC
AGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCAC
TTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATC
ACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTA
CAACAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTT
TCGTTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCT
GCTGCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGA
AAGCAAATTATGATGAATATGAACCACCAACCAGAATAGCTTTATTTATC
TCTTTTTCCTTTCTCTCTTTCTGTTATTTGTTCGCTTGTGTCTATTATGA
GATGATGTTTGCTATGATAATTATGACCCTTCTCTTTATTTTTCCATTTC
ATATTTTGATTGAGTAGCTATAGCTTTGTCTCCGTGAATCATTGTTAATG
AGTAGTGGTGAT
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