CF417675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 EII TF LVYTV++ A DPK+ + + +AP+ IGF V L P +G +NPARSFG AV + + + WI+WVGP VG A ++Y+ Sbjct: 145 EIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 279 EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV N + +W++WVGP + G LA Y Sbjct: 145 EIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 279 EII TF LVYTV++ A DPK+ + + +APL IG V LA P +G +NPARSFG AV + + HW++WVGP + G LA Y Sbjct: 146 EIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 258 EII TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + +WI+W GP +G Sbjct: 146 EIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIG 224
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 258 EII TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + +WI+W GP +G Sbjct: 146 EIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIG 224
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 279 E++ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV + + +W++WVGP V G LA Y Sbjct: 145 EVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA-AYHQYI 291 E + TF+ + + TD A AP IG A+ ++HL +IPIT T +NPARS G A+ N W+FW+ P GAL A YH + Sbjct: 146 EFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 36/97 (37.11%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG-ALAAAAYHQYI 291 E++ TF+ + + +TD +R+ + AP+ IG ++ ++HL +IP+T T +NPARS G A ++ D A + W+FW+ P VG ALA YH ++ Sbjct: 139 EVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPA-LFVGDWAIAELWLFWLAPIVGAALAGLFYHAFL 228
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 EI+ + V+ + ATD + A AP+PIG A+ ++HL +IP+T T +NPARS G A ++ A + W+FW+ P GAL A ++ + Sbjct: 141 EIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229
BLAST of CF417675 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 4 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 291 EI+ + V+ + ATD + A AP+PIG A+ ++HL +IP+T T +NPARS G A ++ A + W+FW+ P GAL A ++ + Sbjct: 141 EIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229 The following BLAST results are available for this feature:
BLAST of CF417675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417675 ID=CF417675; Name=CF417675; organism=Citrus sinensis; type=EST; length=562bpback to top |