CF417690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.048e-23 Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 33 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLVPDHQPVKK 221 RPPEKRQRVPSAYNRFIK+EI+RIKA NPDI+HREAFS AAKNWAHFP+IHFGL H+ KK Sbjct: 108 RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGL-GSHESSKK 169
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 33 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 194 RPPEKRQRVPSAYNRFIK+EIQRIK NP+I+HREAFSAAAKNWAH P +HFGL Sbjct: 104 RPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGL 157
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: CRC_ARATH (Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.589e-18 Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 12 PRPPATSRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHF 173 P PP +PPEK+QR+PSAYNRF++DEIQRIK+ NP+I HREAFSAAAKNWA + Sbjct: 103 PSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: YAB4_ARATH (Axial regulator YABBY 4 OS=Arabidopsis thaliana GN=YAB4 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 30 SRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIH 185 ++PPEKRQR PSAYN FIK+EI+R+KA NP + H+EAFS AAKNWAHFP H Sbjct: 129 NKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: YABDL_ORYSJ (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 12 PRPPATSRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWA 167 PR P +PPEK+ R+PSAYNRF+++EIQRIKA PDI HREAFS AAKNWA Sbjct: 93 PRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWA 144
BLAST of CF417690 vs. ExPASy Swiss-Prot
Match: YAB7_ORYSJ (Protein YABBY 7 OS=Oryza sativa subsp. japonica GN=YAB7 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.806e-15 Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 3 DELPRPPATS---RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHI 182 D+ P P A + +PP ++QR PSAYN F+K+EI+RIK+ P+ITH++AFS AAKNWAH P I Sbjct: 98 DDAPAPAAAAVANKPPGRKQRTPSAYNCFVKEEIKRIKSMEPNITHKQAFSTAAKNWAHLPRI 160 The following BLAST results are available for this feature:
BLAST of CF417690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417690 ID=CF417690; Name=CF417690; organism=Citrus sinensis; type=EST; length=588bpback to top |