CF417694

Overview
NameCF417694
Unique NameCF417694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 80/149 (53.69%), Postives = 103/149 (69.13%), Query Frame = 2
Query:    2 LQAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 448
            L AIT+ +P IKGINFD PHVI  APP P ++HVGGDMF+SVP GDAI MK +LHDW+D HC  LLKNCY ++PE+GKVI+VE +LP       +++   H+D++M+  +PGG+ER   EF  LA GAGF G        + W +EF K
Sbjct:  214 LHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.620e-43
Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 2
Query:    8 AITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKG-DAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 448
            A+ +++P+I+GIN+D PHVI  APP P +EHVGGDMF SVP+G DAI MK +LHDW+DEHC +LLKNCY ++PE GKV+VVE +LPE  + +   +   H+D++M+  +PGGKER   EF  LA  AGF G        + W +EF K
Sbjct:  221 AVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.756e-42
Identity = 82/146 (56.16%), Postives = 98/146 (67.12%), Query Frame = 2
Query:   11 ITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 448
            I  KYP I  INFD PHVI  AP    +EH+GGDMF  VPKGDAIF+K + HDW+DEHCLKLLKNCY ++P+ GKVIV E +LP  P+ SI +K   H D LM+  +PGGKERT  EF  LA  +GF G        + +VMEF K
Sbjct:  221 IVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39
Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = 2
Query:   11 ITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 448
            I  K+ +IKGIN+D PHVI  AP +P +EHVGG+MF+S+P+ DAIFMK VLHDW+DEHC+K+L  CY+S+ + GK+I+VES++P +P  ++ES     LD   ++ + GGKER++ +F  LA+  GF  +         WVME YK
Sbjct:  219 IVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39
Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 2
Query:    2 LQAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFG--GISCELAIGSLWVMEFYK 448
            L+ I +KYP IKGINFD P VI++APP   IEHVGGDMF SVP+GDA+ +K+V H+W+DE C++ L NC+K++  +GKVI+VE +LPE PNTS ESK  S LD LM I + GG+ERT  ++  L+  +GF    ++C  A  SL VMEFYK
Sbjct:  224 LELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACR-AFNSLGVMEFYK 372          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.221e-37
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 2
Query:    2 LQAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERT 352
            L  I  KYP IKGINFD PHVI+ AP +P +EHVGGDMF ++P GDA+FMK + HDW+DEHC KLLKNCY ++P +G+VIV E +LP  P+ S+ +K   H+D +M+    GGKERT
Sbjct:  197 LNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.219e-35
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 2
Query:    2 LQAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 448
            L  I  K+P+I+GINF+ PHVI  AP +P +EHV GDMF+ VP    I +K VLHDW+D+  +K+LKNC+K++PE+G VIV+E +LP+V   + ES +    D+LMM  +PGGKERT  EF  LA  AGF           L VMEF+K
Sbjct:  230 LSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25
Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 2
Query:    2 LQAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPED-GKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGG 397
            ++AI+  +P+IK   FD PHVI ++   P IE +GGDMF+SVP   AI +K +LHDWNDE  +K+LK C  ++P+D GKVI+V+  L E  +  + S +   LD+ M++ + GGKERT+  +  +   AGF G
Sbjct:  203 VKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDHEL-SSTRLILDIDMLVNT-GGKERTKEVWEKIVKSAGFSG 333          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22
Identity = 55/130 (42.31%), Postives = 83/130 (63.85%), Query Frame = 2
Query:   11 ITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIP-EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGG 397
            I   +P+IK   +D PHVI  +P +  +  V GDMF+ +PK DAI MK +LHDW+D+ C+++LK C +++P + GKVI+V+ +L  V +    +K    LD+ MM+ + GGKERT  E+  L   AG+ G
Sbjct:  202 IANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLNT-GGKERTEEEWKKLIHDAGYKG 329          
BLAST of CF417694 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:    5 QAITTKYPYIKGINFDQPHVIDHAPPHPRIEHVGGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIP---EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFY 445
            QAI+  +P++K    D  HV+  AP H  ++ + GDMF+S+P  DA+ +KSVLHDW+ + C+K+LKNC K+IP     GKVI++  ++   P+     +  +  DV +M  +  G ER   E+  + + AG+        +G   ++E Y
Sbjct:  216 QAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFIN--GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 363          
The following BLAST results are available for this feature:
BLAST of CF417694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
COMT1_SACOF1.588e-4353.69Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ4.620e-4352.70Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IEMT_CLABR1.756e-4256.16(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
IMT1_MESCR1.065e-3949.32Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
CHOMT_MEDSA3.099e-3955.63Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
COMT1_EUCGL2.221e-3758.12Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA1.219e-3550.34(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
4OMT_COPJA7.410e-2544.363'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA2.018e-2242.31(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE2.231e-2134.67O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-624 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417694 ID=CF417694; Name=CF417694; organism=Citrus sinensis; type=EST; length=681bp
TCTTCAAGCCATCACTACCAAGTACCCCTATATTAAGGGCATCAATTTCG
ACCAGCCTCATGTTATTGACCATGCCCCACCACATCCACGTATTGAGCAT
GTAGGGGGTGATATGTTCCAAAGTGTTCCAAAAGGTGATGCCATTTTTAT
GAAGTCGGTACTGCACGATTGGAATGATGAACATTGCTTGAAGTTGTTGA
AGAATTGCTACAAAAGCATCCCAGAAGATGGAAAGGTAATCGTTGTGGAG
TCAATGCTTCCAGAAGTTCCTAATACAAGCATTGAATCAAAATCAAATTC
CCATTTGGACGTGCTTATGATGATTCAAAGTCCCGGTGGAAAGGAGAGAA
CAAGGCATGAATTCATGACCCTGGCTACTGGCGCTGGTTTTGGTGGGATC
AGTTGTGAACTTGCTATTGGTAGTCTCTGGGTTATGGAGTTCTATAAGTA
GAGTGCATGCCCATGCATCCTAGAAATAAAACAAATCTTGTGTTGATTGT
CTTGCGTGTATCTCTTTCCAAGCATGCTGATATGTCTCCCAAAGACGAGC
AAGAACCCATGCATTTGACAAACTTCCCACGTACCTGATAGCCATGCTTG
AGAGGAGGAGTCTAGGACTTAATAATAAGTGCTTTGAAATAAATGGGTGC
TTGACACGTGGTCTATCAACTATGTGTGCAA
back to top