CF417700

Overview
NameCF417700
Unique NameCF417700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 76/187 (40.64%), Postives = 101/187 (54.01%), Query Frame = 1
Query:  139 NKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSG-RFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            N+C + VW     +A  P+   GG +L P +++++ +P    G R W R GC FD SGRG C TGDCGG L C    G+PP TLAE  L      DF+D+SLVDG+N+ M   P   +G      C +D+N  CP+ L+ +       C + C  F + +YCC     N  SC PT YSR FK  CP
Sbjct:    7 NRCTYTVW-----AASVPV--GGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAY-GAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSP-TSNGCTRGISCTADINGQCPSELKTQG-----GCNNPCTVFKTDQYCC-----NSGSCGPTDYSRFFKQRCP 174          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 80/195 (41.03%), Postives = 97/195 (49.74%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIRGS-GKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            A T  + N C + VW     +A  P+   GG +L   + + I  P      R WGR  C FD  GRG C TGDCGG L C G  G PP TLAE  L Q    DF+D+SLVDG+NI M+  P   S GKC    C +++N  CP  L+V        C + C  F   +YCCT        C PT  SR FK  CP
Sbjct:   13 AATFEVRNNCPYTVW-----AASTPI--GGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCP 189          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 80/195 (41.03%), Postives = 101/195 (51.79%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQ--DFYDVSLVDGYNIAMSILPIRGS-GKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            A TI + N C + VW     +A  P+   GG +L   + + I  P      R WGR  C F+A+GRG C TGDCGG L C G  G PP TLAE  L Q    DF+D+SLVDG+NI M+  P   S GKC    C +++N  CP  L+V        C + C  F   +YCCT        C PT +S+ FK  CP
Sbjct:   21 AATIEVRNNCPYTVW-----AASTPI--GGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTFFSKFFKQRCP 197          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31
Identity = 78/195 (40.00%), Postives = 99/195 (50.77%), Query Frame = 1
Query:  115 KATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ-QDFYDVSLVDGYNIAMSILP-IRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            +A T  + N+C + VW    AS G   L  GG +L   +++TI + P    G+ W R  C FD SGRG C TGDCGG L C    G PP TLAE +L Q  +D+ D+S + G+N+ M   P  RG   C    C +D+   CPA L+         C  AC  F +  YCCT        C PT YSR FK  CP
Sbjct:   21 RAATFEIVNRCSYTVWAA--ASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRF-GRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRG---CRGVRCAADIVGQCPAKLKAPGG----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCP 200          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.222e-30
Identity = 78/188 (41.49%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  139 NKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIR-GSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            N C + VW     +A  P+   GG +L   +++    PP     R WGR  C FD +GRG C TGDCGG L C G  G PP TLAE  L Q    DF+D+S++DG+NI MS  P   G GKC    CV+++N  CP  L+V        C + C  F   +YCCT        C PT  SR FK  CP
Sbjct:   29 NNCPYTVW-----AAATPI--GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTDLSRFFKQRCP 198          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 77/188 (40.96%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  139 NKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIR-GSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            N C + VW     +A  P+   GG +L   +++    PP     R WGR  C FD +GRG C TGDCGG L C G  G PP TLAE  L Q    DF+D+S++DG+NI MS  P + G GKC    C +++N  CP  L+V        C + C  F   +YCCT        C PT  SR FK  CP
Sbjct:   29 NNCPYTVW-----AAATPV--GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCTQG-----PCGPTELSRWFKQRCP 198          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29
Identity = 76/192 (39.58%), Postives = 98/192 (51.04%), Query Frame = 1
Query:  124 TITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSG-RFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ-QDFYDVSLVDGYNIAMSILP-IRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            T  + N+C + VW    AS G   L  GG +L   +++TI + P  +G + W R  C FD SG G C TGDCGG L C    G PP TLAE +L Q  +D+ D+S + G+N+ M+  P  RG   C    C +D+   CPA L+         C  AC  F +  YCCT        C PT YSR FK  CP
Sbjct:    2 TFEIVNRCSYTVWAA--ASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF-GRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMNFSPTTRG---CRGVRCAADIVGQCPAKLKAPGG----GCNDACTVFQTSEYCCTTG-----KCGPTEYSRFFKRLCP 178          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.328e-28
Identity = 71/155 (45.81%), Postives = 89/155 (57.42%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP-AGLQVRSNSRVVAC 576
            A T T+ N+C   VWP     A  P+   GG +L P + +TI +P    SGR WGR GC FD SGRG CATGDC G+L C  + G  P TLAE T+G  QDFYD+S++DGYN+AMS         CS    V+  +  CP A L    N++  AC
Sbjct:   26 AATFTITNRCSFTVWP-----AATPV--GGGVQLSPGQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCT-LSGQKPLTLAEFTIGGSQDFYDLSVIDGYNVAMSF-------SCSSGVTVTCRDSRCPDAYLFPEDNTKTHAC 165          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.806e-27
Identity = 71/195 (36.41%), Postives = 91/195 (46.67%), Query Frame = 1
Query:  115 KATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPIRGSGKCSYA-GCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            +  T  + N C   VW       GK L     + + P              R W R GC FD +GRG+C TGDC G L C    G PP TLAE  L Q    DF+D+SLVDG+N+AM   P   SG C+    C +D+N  CP  L+         C + C  F + +YCC     N  +C  T +S+ FK  CP
Sbjct:   23 RGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTK-------GARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAF-GQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPT--SGGCTRGIKCTADINGQCPNELRAPG-----GCNNPCTVFKTDQYCC-----NSGNCGLTNFSKFFKDRCP 197          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 64/138 (46.38%), Postives = 80/138 (57.97%), Query Frame = 1
Query:  100 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGC 507
            F+    A T  + N C   VWP     AG P+   GGF+L   ++  I +P   S GR WGR GC F+ +GRG CATGDC G+L C   G   PATLAE T+G  QDFYD+S++DGYN+AM      G   KC  +GC
Sbjct:   15 FAAGASAATFRITNNCGFTVWP-----AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGYNLAMDFSCSTGVALKCRDSGC 142          
The following BLAST results are available for this feature:
BLAST of CF417700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
P21_SOYBN4.200e-3140.64Protein P21 OS=Glycine max PE=1 SV=1[more]
TPM1_SOLLC5.486e-3141.03Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OSMO_TOBAC5.486e-3141.03Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
THM2_THADA9.357e-3140.00Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
OS35_SOLCO1.222e-3041.49Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC4.644e-3040.96Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
THM1_THADA2.305e-2939.58Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
TLP_ORYSJ3.328e-2845.81Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_ACTDE4.806e-2736.41Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
RST3_AVESA1.890e-2346.38Thaumatin-like pathogenesis-related protein 3 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-630 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417700 ID=CF417700; Name=CF417700; organism=Citrus sinensis; type=EST; length=690bp
CTGCCTTCAAAATCTTTTGCTTTTTGCTGAGTTTCAGCCATGGCAGTAAC
AATGCTGCTTAGATCTCTACTCGCTCTCTTGCTCACCACCATCGTCCTCT
TCTCTCACAATATCAAAGCTACAACAATCACATTATTCAACAAATGCGAG
CACCCAGTTTGGCCCGGAATACAAGCGAGCGCAGGCAAGCCACTACTGGC
ACGTGGCGGCTTCAAGCTCCCACCAAACAAGGCCTACACCATACGCCTAC
CGCCCCTCTGGTCCGGGCGCTTCTGGGGTCGCCATGGATGCAGGTTCGAC
GCCTCAGGCCGGGGCCGCTGCGCCACCGGGGACTGCGGCGGATCGCTCTT
CTGCAACGGCATAGGCGGCAGCCCGCCGGCCACCCTCGCCGAAATCACGC
TGGGGCAGCAGCAGGACTTCTACGACGTGAGCCTGGTCGACGGTTACAAC
ATCGCAATGTCGATTTTGCCCATCAGAGGCTCCGGGAAATGCAGCTACGC
TGGGTGTGTGAGTGACCTGAACTTGATGTGTCCCGCGGGGCTACAAGTGA
GGTCCAACAGCAGAGTGGTGGCCTGCAAAAGTGCTTGTTTCGCTTTCAAC
TCGCCCAGGTATTGCTGCACTGGGAGCTTTGGGAATCCTCAATCCTGCAA
GCCCACTGCTTACTCCAGGATTTTCAAGGCCGCTTGTCCC
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