CF417716

Overview
NameCF417716
Unique NameCF417716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_RENSM (Chaperone protein dnaK OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 97/204 (47.55%), Postives = 129/204 (63.24%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIE 614
            GAA+QA +L GE     +D             ET GGVMT LI RNT IPTK+ + F+T  DNQP V IQV++GER  TRDN  LG FEL+GI PA RGVPQ+ V FDIDANGI++VSA+DK TG++  +TIT     LSKE+IE+MV +AE + AED   +++ + +N  E  AY +   + +     KLP   K +++  +E
Sbjct:  351 GAALQAGVLKGER----KDVLLIDVTPLSLGIETKGGVMTKLIERNTAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKPLGTFELTGIAPAQRGVPQVEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSS-LSKEDIERMVADAEAHAAEDKTRREQADVRNSAEQLAYSVDKILSEN--DDKLPEEVKTEVKADVE 547          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_METSB (Chaperone protein dnaK OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQL 647
            GAAVQA +L G+    V+D             ET GGV T LI RNTTIPTKK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIP APRGVPQI V FDIDANGI+NV+A+DK T ++ +I I    G LS+ +I+KMV++AE + AED + ++ V+A+N  E   +    ++ +   + K+  ADK  +E AI      L+G  +
Sbjct:  369 GAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQTAVTIRVFQGEREMAADNKLLGQFDLVGIPGAPRGVPQIEVTFDIDANGIVNVTAKDKATNKEQQIRI-QASGGLSEGDIDKMVKDAEVHAAEDKKRRELVDARNQAEAMVHSAEKSLTE--FAGKVSDADKSALEAAIASVKGVLEGEDV 576          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 103/213 (48.36%), Postives = 133/213 (62.44%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGN 641
            GAAVQA +L G+    V+D             ET GGV T LI RNTTIPTKK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRG+PQI V FDIDANGI+NV+A+DK T ++++I I    G LS  +IEKMV++AE     D + ++ VE KN  E+  +    ++ +     K+ AADK  IE AI      L+G+
Sbjct:  369 GAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGMPQIEVTFDIDANGIVNVTAKDKATNKEHQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRELVEVKNQGESLIHATEKSVSE--YGDKVSAADKGAIESAIAALRTALEGD 574          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_METEP (Chaperone protein dnaK OS=Methylobacterium extorquens (strain PA1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 103/212 (48.58%), Postives = 132/212 (62.26%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDG 638
            GAAVQA +L G+    V+D             ET GGV T LI RNTTIPTKK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRG+PQI V FDIDANGI+NV+A+DK T ++++I I    G LS  +IEKMV++AE     D + ++ VE KN  E+  +    ++ +     K+ AADK  IE AI      L+G
Sbjct:  369 GAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGMPQIEVTFDIDANGIVNVTAKDKATNKEHQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRELVEVKNQGESLIHATEKSVSE--YGDKVSAADKGAIESAITALRSALEG 573          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_CLOD6 (Chaperone protein dnaK OS=Clostridium difficile (strain 630) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 101/222 (45.50%), Postives = 142/222 (63.96%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFE 668
            GA++QA +L+G+    V+D             ET G VMT +I RNTTIPTKK Q+FST +DNQ  V I V +GER+   DN  LG+F+L+ IPPA RG+PQI V FDIDANGI+NVSA+D  TG++ KITIT++   LS+ EIE+ ++EAE     D + K+K+EA N  E+  Y    T+ +  +  K+ + +K+ IE AI   ++ +  NQ A A+E +
Sbjct:  346 GASIQAGVLAGD----VKDLLLLDVTPLSLGIETMGNVMTKIIERNTTIPTKKSQIFSTAADNQTAVDIHVLQGERSMAYDNTTLGRFQLTDIPPAQRGIPQIEVTFDIDANGIVNVSAKDLGTGKEQKITITSNT-NLSEAEIEQKIKEAEMNAEADKQKKEKIEAFNQAESTIYQTEKTLNE--LGDKISSGEKEDIEKAIAD-LKAVKDNQDATAEELK 559          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_BURTA (Chaperone protein dnaK OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 99/205 (48.29%), Postives = 133/205 (64.88%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQ 617
            GAA+Q  +LSG+     +D             ET GGVMT +I +NTTIPTK  QV+ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGIL+V A+DK TG++NKITI  + G LS+ EIEKMV++AE   AED + ++  E++N  +   +  +  + +     KL A +K+KIE A+++
Sbjct:  375 GAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHSQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLRELAESRNQGDALVHSTKKALTE--YGDKLEAGEKEKIEAALKE 572          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_BORPE (Chaperone protein dnaK OS=Bordetella pertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 102/219 (46.58%), Postives = 136/219 (62.10%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEAD 659
            GAA+Q ++LSGE     +D             ET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGIL+VSA+DK TG++NKITI  + G LS++EI++MV++AE    ED    +  +A+N  +   +  R ++ +     KL AA+K+ IE AI+     L     AE D
Sbjct:  375 GAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVKDAEANAEEDHRLAELAQARNQADALVHATRKSLTE--YGEKLEAAEKESIEAAIKDLEDILKTGDKAEID 586          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_BORPA (Chaperone protein dnaK OS=Bordetella parapertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 102/219 (46.58%), Postives = 136/219 (62.10%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEAD 659
            GAA+Q ++LSGE     +D             ET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGIL+VSA+DK TG++NKITI  + G LS++EI++MV++AE    ED    +  +A+N  +   +  R ++ +     KL AA+K+ IE AI+     L     AE D
Sbjct:  375 GAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVKDAEANAEEDHRLAELAQARNQADALVHATRKSLTE--YGEKLEAAEKESIEAAIKDLEDILKTGDKAEID 586          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: DNAK_BORBR (Chaperone protein dnaK OS=Bordetella bronchiseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 102/219 (46.58%), Postives = 136/219 (62.10%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEAD 659
            GAA+Q ++LSGE     +D             ET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGIL+VSA+DK TG++NKITI  + G LS++EI++MV++AE    ED    +  +A+N  +   +  R ++ +     KL AA+K+ IE AI+     L     AE D
Sbjct:  375 GAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVKDAEANAEEDHRLAELAQARNQADALVHATRKSLTE--YGEKLEAAEKESIEAAIKDLEDILKTGDKAEID 586          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.074e-43
Identity = 102/220 (46.36%), Postives = 135/220 (61.36%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADE 662
            GAAVQ  +L+G+    V D             ET GGV T LI RNTTIPTKK QVFST SD Q  V I+V++GER    DN LLG F L GIPPAPRGVPQI V FDIDANGI++VSA+DK TG++ +I I    G LSK+EIE M+++AE+Y   D + ++ +E  N  E+  +      K E+  ++LPA + +K++  I      L   + A+ +E
Sbjct:  420 GAAVQGGVLAGD----VTDVLLLDVTPLSLGIETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEIKVHQGEREMANDNKLLGSFTLVGIPPAPRGVPQIEVVFDIDANGIVHVSAKDKGTGKEQQIVI-QSSGGLSKDEIENMIKKAEEYATADKQKRELIEIVNQGESIVHDTET--KMEEFKSQLPAEECEKLKKEIADLRTLLANKETADLEE 632          
The following BLAST results are available for this feature:
BLAST of CF417716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RENSM1.588e-4347.55Chaperone protein dnaK OS=Renibacterium salmoninar... [more]
DNAK_METSB1.588e-4346.98Chaperone protein dnaK OS=Methylocella silvestris ... [more]
DNAK_METPB1.588e-4348.36Chaperone protein dnaK OS=Methylobacterium populi ... [more]
DNAK_METEP1.588e-4348.58Chaperone protein dnaK OS=Methylobacterium extorqu... [more]
DNAK_CLOD61.588e-4345.50Chaperone protein dnaK OS=Clostridium difficile (s... [more]
DNAK_BURTA1.588e-4348.29Chaperone protein dnaK OS=Burkholderia thailandens... [more]
DNAK_BORPE1.588e-4346.58Chaperone protein dnaK OS=Bordetella pertussis GN=... [more]
DNAK_BORPA1.588e-4346.58Chaperone protein dnaK OS=Bordetella parapertussis... [more]
DNAK_BORBR1.588e-4346.58Chaperone protein dnaK OS=Bordetella bronchiseptic... [more]
HSP7E_DROME2.074e-4346.36Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-646 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417716 ID=CF417716; Name=CF417716; organism=Citrus sinensis; type=EST; length=681bp
ACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTAATGAGAAG
GTTCAGGACCTCTTATTGCTTGATGTCACCCCTCTGTCACTGGGTTTGGA
GACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTC
CAACCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGG
GTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAA
CTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGG
TTCCACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAAC
GTTTCTGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCAC
AAATGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAG
AGGCAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAG
GCGAAGAATGGTCTTGAGAATTATGCTTACNACATGAGAAACACAATCAA
GGATGAAAAGATCAGCGCAAAGCTTCCTGCTGCTGACAAGAAGAAAATTG
AAGATGCCATTGAGCAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCA
GAGGCAGATGAGTTTGAAGATAAGATGAAAG
back to top