CF417775

Overview
NameCF417775
Unique NameCF417775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAW (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain MW2) GN=secY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAS (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain MSSA476) GN=secY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAR (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain MRSA252) GN=secY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAN (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain N315) GN=secY PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAM (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=secY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAAC (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain COL) GN=secY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STAA8 (Preprotein translocase subunit secY OS=Staphylococcus aureus (strain NCTC 8325) GN=secY PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 85/242 (35.12%), Postives = 137/242 (56.61%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPAS---FGRTVAEAFQDGN--YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF-TGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++GE GR+K+   TRY ++  A +Q IG       Y+      +               G+AF  ++G++I+   +GNG S++IF  I+S LPAS   FG+T     +D +  ++ +  +++S ILL +G +YV EA RKIPI YA + T++  G Q + YLP KVNS+GV+P+IF+ +   LP TL  F       +  A A NP  +  +   I+LI  F Y+Y F+Q++P+ +++ LK+
Sbjct:  101 KQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQ-ATYLPLKVNSAGVIPVIFAMAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKK 341          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_GUITH (Preprotein translocase subunit secY OS=Guillardia theta GN=secY PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 84/236 (35.59%), Postives = 136/236 (57.63%), Query Frame = 3
Query:    3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS----FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            K EGE GR+K++Q TRY ++ +A++Q IG   ++RPYV ++              GS    +  E+I++  +GNG SLLIF +IIS LP      +     +   + +  ++  F ++++GI+++QE  ++IPI  ++R   +     +++YLP K+N SGVMPIIF+++ L LP  LA+      L +  + L  G S     YL     LI FF+Y+YT L L+P+DVS+ LK+
Sbjct:   99 KEEGELGRQKIVQLTRYVALVWALIQSIGVSFWVRPYVFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPSLLIFINIISGLPKLLQSQIQSTRLNIQALDIFVLVFIFSVMIIGIIFIQEGIKRIPI-ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSNEQL-RTVLHLFDGTSNNKLLYLLFYFTLILFFSYFYTSLILNPNDVSKNLKK 332          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_AQUAE (Preprotein translocase subunit secY OS=Aquifex aeolicus GN=secY PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 85/245 (34.69%), Postives = 128/245 (52.24%), Query Frame = 3
Query:    3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLR--------PYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQ-----DGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            K EG+ GR K+ +YT+Y ++  A VQ +G   ++R        P V +               G+ F  +I +RI++  +GNG SL+IF  I+    A+F   V + ++     D   + L  II   I +++GIVYVQEAER+IPI Y  R   R     R  YLP K+N +GV+PIIF+ + L +P TL  F     +K  A    PG  FY    +  I FF Y+YT + ++P +++E L +
Sbjct:  102 KEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIV----ANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFLYVTFIVFFTYFYTAVLINPVELAENLHK 342          
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_STACT (Preprotein translocase subunit secY OS=Staphylococcus carnosus (strain TM300) GN=secY PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33
Identity = 83/242 (34.30%), Postives = 135/242 (55.79%), Query Frame = 3
Query:    6 REGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVN-----DFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGN-----YIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAA-LKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698
            ++G+ GRKK+   TRY ++  A +Q IG       Y+      D               G+AF  ++GE+I+   +GNG S++IF  I+S LP+S  +   +AF   +     ++ +A ++I  +LL +G VYV +A RKIPI YA + +++  G   + YLP KVNS+GV+P+IF+ +   LP TL  F   A   ++ A   NP  +  +   I+LI  F Y+Y F+Q++P+ +S+ LK+
Sbjct:  101 KQGDVGRKKLNNVTRYFAIILAFIQSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIIIFAGILSTLPSSLIQFYQQAFVGQSDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKIPIQYAKKQSTQRLG-SNATYLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADWAQQIANTANPSSNIGMVIYIILIIAFTYFYAFVQVNPEKMSDNLKK 341          
The following BLAST results are available for this feature:
BLAST of CF417775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
SECY_STAAW3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAAS3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAAR3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAAN3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAAM3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAAC3.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_STAA83.161e-3435.12Preprotein translocase subunit secY OS=Staphylococ... [more]
SECY_GUITH5.392e-3435.59Preprotein translocase subunit secY OS=Guillardia ... [more]
SECY_AQUAE2.676e-3334.69Preprotein translocase subunit secY OS=Aquifex aeo... [more]
SECY_STACT4.564e-3334.30Preprotein translocase subunit secY OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-705 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417775 ID=CF417775; Name=CF417775; organism=Citrus sinensis; type=EST; length=698bp
AGAAAAGAGAAGGTGAAGCGGGAAGGAAGAAAGTGCTTCAGTACACCCGA
TATGCTTCGGTTGGTTTTGCAATAGTACAGGNTATTGGTCAAGTCCTTTA
TCTTCGTCCCTATGTCAATGACTTCAGTACGGAATGGGTTCTGACATCTG
TTACTTTATTGACACTTGGCTCTGCATTCACTACATACATTGGGGAAAGG
ATCTCTGATCTAAAACTTGGAAATGGCACGTCTCTTTTGATATTCACGAG
CATTATCTCCTACTTGCCAGCATCATTTGGTAGGACTGTCGCTGAGGCAT
TCCAGGATGGTAACTACATTGGGCTAGCCACCATTATTATTTCATTCATC
CTATTAGTCCTCGGCATTGTATATGTCCAGGAAGCAGAGAGAAAAATCCC
AATCAACTATGCCTCCAGATACACTAGCAGAAGCGGAGGGCTCCAAAGAT
CTGCTTACCTACCCTTTAAGGTGAATAGTTCTGGAGTGATGCCAATCATA
TTTTCCACATCATCACTGGCTCTTCCCGGTACTTTAGCACGATTCACTGG
TATAGCTGCACTTAAGAAGGCTGCAGTGGCTTTGAATCCAGGGGGTTCGT
TCTACCTTCCGACCAATATCCTCTTGATAGCTTTCTTCAACTACTACTAC
ACTTTCCTGCAATTGGATCCTGATGATGTCAGTGAACAGTTGAAGCGC
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