CF417778

Overview
NameCF417778
Unique NameCF417778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLTR (6-phosphogluconolactonase OS=Chlamydia trachomatis GN=pgl PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 58/210 (27.62%), Postives = 93/210 (44.29%), Query Frame = 1
Query:   79 NKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            N    + + DS+E+            + K   ++G+F V LSGG     + + +        + +K  VFW DER        SNY  A D  L  + I    ++ + D    +G  E YE  ++      I           FD+++LG+G DGH  SLFP    L+E E++V F  + P+    R+T TFP++  + ++   V G  K
Sbjct:    8 NDANRMLIADSQEEFLQIACYDWISTANKAIHKRGAFYVALSGGKTPLQIFQEIVKKRAAISDCSKIVVFWGDERANEDVEAGSNYLKAMD-ILKGLRIPEDQIFRM-DTADPKGD-EAYEALIQKYVPDAI-----------FDMVMLGVGEDGHTLSLFPETHALEEKERFVVF-NEVPQLHTRRMTLTFPIVRQARHLVAYVQGENK 202          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL_HAEIN (6-phosphogluconolactonase OS=Haemophilus influenzae GN=pgl PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 52/173 (30.06%), Postives = 77/173 (44.51%), Query Frame = 1
Query:  193 VVLSGGSLIDSLRK-LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            + LSGGS    L K L + PY + I W   H +W D+R+VP    +SNY          + I   N++ I          + +E  L  +  + +           FD ++LGMG DGH ASLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G  K
Sbjct:   32 ISLSGGSTPKLLFKTLAKSPYAEQINWKNLHFWWGDDRMVPPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFEEELSAVIPNGV-----------FDWIILGMGIDGHTASLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGESK 191          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLPN (6-phosphogluconolactonase OS=Chlamydia pneumoniae GN=pgl PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11
Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = 1
Query:  172 KEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            K++G+F V LSGG     + K +       I+ +K  +FW DER+ P    +SNY  A    L  + I    ++ + +  + +GA +  E     L ++ I   S       FD+++LG+G DGH  SLF     L+E    V F    P    ER+T TFP ++   ++ + V G  K
Sbjct:   39 KQRGAFYVALSGGKTPLEIYKDIVINKDKLIDPSKIFLFWGDERLAPITSSESNYGQAMS-ILRDLNIPDEQIFRM-ETENPDGAKKYQE-----LIENKIPDAS-------FDMIMLGLGEDGHTLSLFSNTSALEEENDLVVF-NSVPHLETERMTLTFPCVHKGKHVVVYVQGENK 202          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11
Identity = 50/173 (28.90%), Postives = 76/173 (43.93%), Query Frame = 1
Query:  193 VVLSGGSLIDSLRK-LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            + LSGGS    L K L + PY + I W   H +W D+R+V     +SNY          + I   N++ I          + ++  L  +    +           FD ++LGMG DGH +SLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G GK
Sbjct:   32 ISLSGGSTPKLLFKTLAQSPYAEQINWRNLHFWWGDDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFQAELSAVISDGV-----------FDWIILGMGADGHTSSLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGK 191          
The following BLAST results are available for this feature:
BLAST of CF417778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL_CHLTR5.996e-1227.626-phosphogluconolactonase OS=Chlamydia trachomatis... [more]
6PGL_HAEIN1.023e-1130.066-phosphogluconolactonase OS=Haemophilus influenza... [more]
6PGL_CHLPN2.278e-1130.176-phosphogluconolactonase OS=Chlamydia pneumoniae ... [more]
6PGL_AGGAC2.976e-1128.906-phosphogluconolactonase OS=Aggregatibacter actin... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-708 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417778 ID=CF417778; Name=CF417778; organism=Citrus sinensis; type=EST; length=709bp
AACATTTCCCTTGATCGGAACAAATCATCGGACTGCGTGAGAATCAAGGC
ATCATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAG
TTTTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCC
GATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTT
ATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGT
ATGTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAA
AGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGA
TGGTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCA
ATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTC
AAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTT
TCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAG
CTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTT
ACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCAC
CTTCCCTGTAATCAACTCATCTGCATATATTGCCATGGTGGTGTGTGGTG
CTGGAAAAT
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